| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3692 |
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| Symbol | |
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| ID | 5079026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4301856 |
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| End bp | 4303706 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640500899 |
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| Product | LppC family lipoprotein |
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| Protein accession | YP_001185199 |
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| Protein GI | 146294775 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3107] Putative lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.348011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAAAAA GCCTGAATAC AACTAAGTTC GTTTCCGTGG CCATTTTATC GGCAATTCTA
GCGGGTTGTG GCACTTCTAC GCCCACAACC TCGACTGGTA CAGCCTCCAC AGCGGTCACC
TCTTTAGCCT CTGCTCCTTT GGCGCCCAAT GTATATTTAG CACAGGCAGC CAATAGTCAG
GACGCACAGC AACGAGATAC CAATCTGCTA CTTGCAGCGC ATGCGTATAT CAATGCTAAC
GATTATGCCA CCGCGCAAAA ACTGCTGAAG TCGATGCAAC CTAGCTTAAC GCAGACTCCA
ACTCTATTAG CAGAGCACAA ATATCTCACC GCTCGAGTGC TTGAGCATAC CTCGACCTAT
ACTGATGCGC TCAATATATT AAATTATCCT AGCACTTGGA GCCTGCCGAA ATGGCAGATG
GTGGCATATC ACCAGTTTAA AGCTCACTTA TATCAACTCA ATAAGCAGCC CATTGAACAA
GTACGTGAGC TAAGTTTACT CACGACCTAT TTACCCTCTG CAGAGGCGAA CGAAGTCAAT
AATAAAATTT GGCAAGTGCT ACAGCCTATG CATGAACAAA CGCTGCAAAA TTTTACCCGT
GATACTAAGA GCCCGATCTT TGCAGGCTGG TTACAACTAG CCTATATCGC GAAGCATTAT
GCCGTCGATC CGACCCAATT AGTGCGCTAC TTAGGTGAAT GGCAGAAACA GAACCCTTAT
CATCCTGCTG CCGCCAAATT GCCCGCAGAC TTAGATAGAG CACTTAATGC TAAGCCTTTT
TCACCCAAGA ATATAGCGGT GCTATTACCA CTCACAGGCT CAAGAGCCAA TGCCGCCAAT
GCAATTCGCC AAGGCATATT AGCCAGTTAC ATGGCCAAAC CTAACGAACA AGTTGCCGTC
AATTTTTACG ATACCGCCAA TGATGCAGTA TCCGCTTACC AGCAAGCGGT GGCCGCTGGG
GCGGAGTTTA TTATTGGCCC ACTATTGCCG AACGAAATCG ATCAGTTACA GGCAATGCCA
ACAGCCACAG GAGCGGTGTC AACAAGCACA TCTATTCCGC AGTTATTTTT AAATCAGACT
GACAAGTTAG TACCTGAGGC CAACAAATTC TACTTCGCCC TCTCACCCGC ACAAGAAGCC
GCTGACGCCG CAGCACGTAT GTATCAAGAT GGCGTAACTA TGCCGTTATT GCTTGCCAGC
AATGATGCCA TTGGTAAGCG CATGGCCGAG AGTTTTACCC AAGCGTGGAA GAAAAAGAGT
GACACTCCCA TCGAAGTTTA TTACTACGAT AGTGGAGATA AAATGCGTAC AACCGTACAA
GATGCCCTCG GGGTTCGCGA TAGCCAAGAA CGCATTGCCC GTATCAAGGA ACTCCTTGGC
AACTCAGTAC AAGCCGATTT TCGGTCACGC CAAGATATCG ATGCGATTTA TATGATATCA
ACGCCGCAGG AGCTAACACT GCTCAAAGCC TTTATTGATG TTAACTTTAG CGTTTTTACT
CAGCCAGTGC CTTTGTACAC ATCGAGTCGT AGTCGTATCG ATAATGAATC GAGCCAAACC
GCGCAGGATT TAAATAATCT CACCATGAGC GATGCCCCTT GGCTAATGCA AAATGGTGAA
GAAAACCTGA TGGTCAATAC CCTGTGGACG GGTTGGAACA ATGGCCAGAA GCGTTTGTTT
ATCATGGGTT ATGACGCGAT GGATTTAATT AGCAAATTAG CCCAAATGCG CTCATTCCCA
GGATATCAAT TTAACGGCCG CAGCGGTGTT TTATCAGTCA ACCCAGACGG AGTGATTAAC
CGCCAGTTAA GCTGGGGACG ATACCAAAGA GGCAGTTTTC GTCAGCTATG A
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| Protein sequence | MLKSLNTTKF VSVAILSAIL AGCGTSTPTT STGTASTAVT SLASAPLAPN VYLAQAANSQ
DAQQRDTNLL LAAHAYINAN DYATAQKLLK SMQPSLTQTP TLLAEHKYLT ARVLEHTSTY
TDALNILNYP STWSLPKWQM VAYHQFKAHL YQLNKQPIEQ VRELSLLTTY LPSAEANEVN
NKIWQVLQPM HEQTLQNFTR DTKSPIFAGW LQLAYIAKHY AVDPTQLVRY LGEWQKQNPY
HPAAAKLPAD LDRALNAKPF SPKNIAVLLP LTGSRANAAN AIRQGILASY MAKPNEQVAV
NFYDTANDAV SAYQQAVAAG AEFIIGPLLP NEIDQLQAMP TATGAVSTST SIPQLFLNQT
DKLVPEANKF YFALSPAQEA ADAAARMYQD GVTMPLLLAS NDAIGKRMAE SFTQAWKKKS
DTPIEVYYYD SGDKMRTTVQ DALGVRDSQE RIARIKELLG NSVQADFRSR QDIDAIYMIS
TPQELTLLKA FIDVNFSVFT QPVPLYTSSR SRIDNESSQT AQDLNNLTMS DAPWLMQNGE
ENLMVNTLWT GWNNGQKRLF IMGYDAMDLI SKLAQMRSFP GYQFNGRSGV LSVNPDGVIN
RQLSWGRYQR GSFRQL
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