| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3563 |
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| Symbol | |
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| ID | 5078799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4141448 |
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| End bp | 4142020 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640500766 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_001185071 |
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| Protein GI | 146294647 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTAAAGC TGCGCCAAAC TGGTTTCACC TTAATGGAGG TGATGCTGGT GATTTTGCTG
ATGGGACTCA CCGCTGCTGC TGTGACTATG TCTATTGGTA ACTCGGGGCC ACAGCAGGCT
CTTGAAAGAA CGGCGCAGCA GTTTATGGCC GCGACAGAAT TAGTGCTCGA TGAAACGGTT
TTAAGCGGTC AATTTATTGG TATTGTGATT GAAAAAACTA GTTATCAGTT TGTTTTTTAT
AAAGATGGTA AATGGAATCC TCTGGAAAAA GACAGAATGC TGTCTGAAAA ACAGATGGAG
ACAGGGGTGT CGTTAAACTT GGTGCTCGAT GGTTTACCTT TAGTGCAAGA AGATGAAGAG
GAAAAATCTT GGTTTGATGA GCCATTTATT GAAGCTAAAA CCGAGGATAA AAAGAAACAT
CCAGAGCCTC AGATCATGTT ATTCCCCAGT GGTGAAATGA GTGCTTTTGA ACTGAGTTTT
ATCGCAAAAA CCGATAAGGG ACAGATTGAT GTACTGGTGG TGGGTGATGC GCTTGGGCGT
TTAACTCTAG GACGGCCAGA TGAAATACGT TAA
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| Protein sequence | MLKLRQTGFT LMEVMLVILL MGLTAAAVTM SIGNSGPQQA LERTAQQFMA ATELVLDETV
LSGQFIGIVI EKTSYQFVFY KDGKWNPLEK DRMLSEKQME TGVSLNLVLD GLPLVQEDEE
EKSWFDEPFI EAKTEDKKKH PEPQIMLFPS GEMSAFELSF IAKTDKGQID VLVVGDALGR
LTLGRPDEIR
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