Gene Sputcn32_3557 details

Gene Information

• Locus tag: Sputcn32_3557
• ID: 5078750
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: -
• Start bp: 4136865
• End bp: 4137626
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640500760
• Product: type II secretion system protein N
• Protein accession: YP_001185065
• Protein GI: 146294641

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCTTGA TAAAAAAAGT CATCATAGGT GTACTGATTT ATTTAGTATT TTTAGTCGTT 
CTATTTCCCG CTAAGATTGC GATAGCATTA GCGCCATTAC CTGCGAACAT CAGTTTTTCG 
GGGGTGAATG GCAGTATTTG GTCTGGCAGT ATTGAAACCT TAAGTGTGCC GCAACGCCAA 
CTTGAGCAAA TACGCTGGGA GCTGAGTCCT TGGGCGTTAT TTTTAGGAAA AGTTAAGGTT 
GATTTTCAGA TAGGTAGTCG CGCGACGCCA GTCAGTTCTA AAGGGCTGGT CACTTGGTCT 
TTAGGTGGCT TAAGTGCCAA AGGATTGCGT TTTGAGGCGC CAGACAGTTT TCTTATTGGT 
AATGCTAAGT TGCCGTTTAG AACTGAAATA ACGGGTGAAG TCAGCCTATT AGTCGAAACG 
CTTGAGCAGG GTAAGCCTTG GTGTGAGCAG TTATCAGGCA AACTGTTTCT AAATCAAACC 
CATGTGAAAA ACCAGTTTGG TGAATATCCA TTAGGCAATA TTGAGCTAGG GTTAAGCTGC 
GTTGATGGTA AAGCTCAGTT AATGACCGAT GAAACTAAAA ATCAGTTGGG CATTGTGGGC 
ACTTTGCAAT TAGTGGAGGA CAACATGGTG AGTGTTACCG CTAAAATTAA AGAAACCGCT 
GAGCAGCCTA AGGATATGCG TGAATCATTG GGAATACTGG GCAAACGTGG TACTGACGGT 
TATTTCCCTG TGGTGTATCA GGGGCGTATT CCGGGGCTGT AG 

 

Protein sequence

MSLIKKVIIG VLIYLVFLVV LFPAKIAIAL APLPANISFS GVNGSIWSGS IETLSVPQRQ 
LEQIRWELSP WALFLGKVKV DFQIGSRATP VSSKGLVTWS LGGLSAKGLR FEAPDSFLIG 
NAKLPFRTEI TGEVSLLVET LEQGKPWCEQ LSGKLFLNQT HVKNQFGEYP LGNIELGLSC 
VDGKAQLMTD ETKNQLGIVG TLQLVEDNMV SVTAKIKETA EQPKDMRESL GILGKRGTDG 
YFPVVYQGRI PGL