Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3548 |
Symbol | |
ID | 5078741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4122737 |
End bp | 4123549 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640500751 |
Product | 3'(2'),5'-bisphosphate nucleotidase |
Protein accession | YP_001185056 |
Protein GI | 146294632 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
TIGRFAM ID | [TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCCAG AAGAGTTGAT CGACGAAGTT ATTGCGATTG CGACCGATGC AGGGATAACT ATCCGTGACA TTTATCTCAA AGGTAATTTT GAGCGAGAAA TGAAGTCTGA CAATACCCCT GTCACTTCCG CAGATTTAGC GGCGAACAAG ATCATTTGTG ACCGATTAAC CGCCTTAACG CCTGATATTC CTGTGTTATC TGAAGAGGCG GCCGATATTG CGTTGAGTGT GCGTGAGTCT TGGAAGCGCT ATTGGTTAGT TGATCCACTC GATGGTACGG GGGAGTTTAT CGCCGGCAGT GGTGATTTTT CGGTAATTAT TGCATTGGTG GAACACAATC GTCCCGTGAT GGGTGTGGTT TATGTACCTA TGACGCAAGT CTGTTATTAC GCCATTGCAG GTTTAGGGGC TTATAAACGT ACTGATAAAC AGGAAGTTCG CATAAGTAGC CGCCAAATCG AGCACCGTGA AAAGGTATCC TTACGATTGG CTGTGAGCCG CCGCCAGGAT CCGCAGTCAG TACTAACACT GTTCAATCAC CCTAAATATT GTGAACTCGT GGTGATGGGG GGCGCTGCGC TAAAGAGTTG TCTTGTTGCC GAAGGTCGAG CCGATTGTTA TGTACGCGTC GGACCTACGG GAGAGTGGGA CACGGGCGCG GCGCAAATTA TTGTCGAGGA AGCGGGCGGT CAGCTGATGG ATACCGAGTT GCAACCATTA ACCTACAATG AGCGTGAGAC GCTTGAAAAT CCAAACTTTA TTGTGGTTGG CGCACCCAAC TTAGAGTGGG ATAAAATTTT AATTGGTGAA TAA
|
Protein sequence | MKPEELIDEV IAIATDAGIT IRDIYLKGNF EREMKSDNTP VTSADLAANK IICDRLTALT PDIPVLSEEA ADIALSVRES WKRYWLVDPL DGTGEFIAGS GDFSVIIALV EHNRPVMGVV YVPMTQVCYY AIAGLGAYKR TDKQEVRISS RQIEHREKVS LRLAVSRRQD PQSVLTLFNH PKYCELVVMG GAALKSCLVA EGRADCYVRV GPTGEWDTGA AQIIVEEAGG QLMDTELQPL TYNERETLEN PNFIVVGAPN LEWDKILIGE
|
| |