| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3501 |
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| Symbol | |
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| ID | 5080536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4066507 |
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| End bp | 4067376 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640500699 |
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| Product | patatin |
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| Protein accession | YP_001185009 |
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| Protein GI | 146294585 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4667] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0437866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATG TGGCCTTAGT ATTAGAAGGT GGCGGCCTCA GAGCCATTTA TACCGCAGGT
GTATTAGACG CGTTTCTACA GCAGTCACTC AACTTTAGTT ATGTGATTGG TGTGTCGGCG
GGAGCGATTT ATCCTGCATC CTATGTGTCA CGTCAGTTTG GCCGTAATCT CCAAATCCAG
CAGCAATATC TTAATGACAA ACGCTATATG GGCGTTCGTC ATTGGCTGGC GACAGGCAAC
TATGTCAACA CTGACTTTAC CTACCGTCGT ATGGCTTATG AGTTGCTGCC ATTTGATTTT
GAGACATTTT TAAAGAGTGA CACTGAATTT AAAGTAGGGG CTTTTAACTG CAACACAGGC
AAAACGGATT ACTTTAGCAG AGTAGATTTT AGCTGCCATG ATAAATTATT GGATGTACTT
ATTGCCTCCT CTAGCCTGCC TTTTATGTCT AAACCCTGCG TAATCAACCA CAATCCTTAC
CTTGATGGTG GGATTGCTGA ACCTATACCT GTGCTGCAGG CTCAAAAAGA CGGTTATTCT
CGCCAAGTAG TGATCTTGAC TCAAGATCAG CACTACCAAA AATCACCCAT GAAAATGAAT
TGGTTAGCGC GCAAAACCTA TAAACGCTAT CCCGCAGTTG CCCATGCATT AAGCGAGCGC
CATCGAGTTT ACAACCGCGC GTTACTCGAT ATCGACCAAG CCGTTATCGC AGGTAAAGCC
TTTGTGATCC GTCCCGACAA GCCACTTAAT TTATCAAGAC TTGATCGTAA TATTGATAAA
GTGACCGCTG TTTATCAGCA AGGGCTTACC GATGGGAATG CTATTCTGCC CACCTTGCTC
ACTTGGCTAG TGAAGCCTGA AGGTGGCTAA
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| Protein sequence | MKDVALVLEG GGLRAIYTAG VLDAFLQQSL NFSYVIGVSA GAIYPASYVS RQFGRNLQIQ
QQYLNDKRYM GVRHWLATGN YVNTDFTYRR MAYELLPFDF ETFLKSDTEF KVGAFNCNTG
KTDYFSRVDF SCHDKLLDVL IASSSLPFMS KPCVINHNPY LDGGIAEPIP VLQAQKDGYS
RQVVILTQDQ HYQKSPMKMN WLARKTYKRY PAVAHALSER HRVYNRALLD IDQAVIAGKA
FVIRPDKPLN LSRLDRNIDK VTAVYQQGLT DGNAILPTLL TWLVKPEGG
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