Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3456 |
Symbol | |
ID | 5079847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4023845 |
End bp | 4024648 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640500655 |
Product | flagellin domain-containing protein |
Protein accession | YP_001184965 |
Protein GI | 146294541 |
COG category | [N] Cell motility |
COG ID | [COG1344] Flagellin and related hook-associated proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGGTG TTCACACTAA TTACGCTTCA ATCGTTGCAC AGGGCGCTGT AAACAAAAGC AATAACCTAC TGACTAACGC GATGGAGCGT TTATCAACAG GTTTACGTAT CAACAGTGCA TCAGATGATG CAGCGGGTCT GCAAATTGCT AACCGTATGA ATGCAAACGT GAAAGGTATG GAAACTGCCT CACGTAATAT TTCAGATGCG ACCTCTATGC TGCAAACTGC TGATGGTGCG TTAGAAGAGT TAACGACCAT TGCCAATCGT CAAAAAGAAT TGGCGACCCA AGCGGCTAAC GGTGTGAACT CAGCAGATGA TTTAACTGCA TTGGATGCTG AGTTTAAAGA GCTAAACAAA GAAATTTCCC GTATTCTCGA TAATACAACT TATGCTGGTA ATAACCTGTT CACTAAGTTG GAAGCGGGTG TGACTTTCCA AATTGGCGCA GGAACGGCTG AAACATTGGC CGTTACAACA ACAGCTATCG ATGACGCTGC ATTAGCAGCA GGTGATCTAA CAACAGGTGC TAACGCAGCG ATTACGCTCG TGGATACATT CCTTGCTGCT GTTGGTACTG AGCGTTCAAC TTTAGGTGCC AATATTAACC GTCTTGGCCA TACTGCGGCT AACTTAGCCA GCGTGACTGA AAACACTAAA GCCGCAGCAG GCCGTATTAT GGATGCCGAT TTTGCGGTTG AATCAGCCAA TATGACGCGT AACCAACTGC TTGTTCAAGC AGGTACTACA GTACTGTCTT CTGCTAACCA AAATACGGGT TTAGTGATGG GCTTACTGCG CTAA
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Protein sequence | MLGVHTNYAS IVAQGAVNKS NNLLTNAMER LSTGLRINSA SDDAAGLQIA NRMNANVKGM ETASRNISDA TSMLQTADGA LEELTTIANR QKELATQAAN GVNSADDLTA LDAEFKELNK EISRILDNTT YAGNNLFTKL EAGVTFQIGA GTAETLAVTT TAIDDAALAA GDLTTGANAA ITLVDTFLAA VGTERSTLGA NINRLGHTAA NLASVTENTK AAAGRIMDAD FAVESANMTR NQLLVQAGTT VLSSANQNTG LVMGLLR
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