Gene Sputcn32_3456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3456 
Symbol 
ID5079847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4023845 
End bp4024648 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content45% 
IMG OID640500655 
Productflagellin domain-containing protein 
Protein accessionYP_001184965 
Protein GI146294541 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGGTG TTCACACTAA TTACGCTTCA ATCGTTGCAC AGGGCGCTGT AAACAAAAGC 
AATAACCTAC TGACTAACGC GATGGAGCGT TTATCAACAG GTTTACGTAT CAACAGTGCA
TCAGATGATG CAGCGGGTCT GCAAATTGCT AACCGTATGA ATGCAAACGT GAAAGGTATG
GAAACTGCCT CACGTAATAT TTCAGATGCG ACCTCTATGC TGCAAACTGC TGATGGTGCG
TTAGAAGAGT TAACGACCAT TGCCAATCGT CAAAAAGAAT TGGCGACCCA AGCGGCTAAC
GGTGTGAACT CAGCAGATGA TTTAACTGCA TTGGATGCTG AGTTTAAAGA GCTAAACAAA
GAAATTTCCC GTATTCTCGA TAATACAACT TATGCTGGTA ATAACCTGTT CACTAAGTTG
GAAGCGGGTG TGACTTTCCA AATTGGCGCA GGAACGGCTG AAACATTGGC CGTTACAACA
ACAGCTATCG ATGACGCTGC ATTAGCAGCA GGTGATCTAA CAACAGGTGC TAACGCAGCG
ATTACGCTCG TGGATACATT CCTTGCTGCT GTTGGTACTG AGCGTTCAAC TTTAGGTGCC
AATATTAACC GTCTTGGCCA TACTGCGGCT AACTTAGCCA GCGTGACTGA AAACACTAAA
GCCGCAGCAG GCCGTATTAT GGATGCCGAT TTTGCGGTTG AATCAGCCAA TATGACGCGT
AACCAACTGC TTGTTCAAGC AGGTACTACA GTACTGTCTT CTGCTAACCA AAATACGGGT
TTAGTGATGG GCTTACTGCG CTAA
 
Protein sequence
MLGVHTNYAS IVAQGAVNKS NNLLTNAMER LSTGLRINSA SDDAAGLQIA NRMNANVKGM 
ETASRNISDA TSMLQTADGA LEELTTIANR QKELATQAAN GVNSADDLTA LDAEFKELNK
EISRILDNTT YAGNNLFTKL EAGVTFQIGA GTAETLAVTT TAIDDAALAA GDLTTGANAA
ITLVDTFLAA VGTERSTLGA NINRLGHTAA NLASVTENTK AAAGRIMDAD FAVESANMTR
NQLLVQAGTT VLSSANQNTG LVMGLLR