| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3422 |
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| Symbol | |
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| ID | 5079813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3992452 |
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| End bp | 3992898 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640500621 |
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| Product | fimbrial protein pilin |
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| Protein accession | YP_001184931 |
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| Protein GI | 146294507 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGGTC TAACGTTAAA AACAGGGTTA AATCATAAGG CTAAAGGTTT TACCCTAATC
GAATTAATGA TTGTTGTTGC CATTATTGGT ATTTTGGCCG CAATCGCATT ACCTGCTTAT
CAAGATTACA CCATTAAATC CCAAATTAAC GGAGGATTAT CAGAAGTATC AGCCTTGAAA
AACTCTTTTG AAGTCGCAGT ATTGGATGAT ACGGATCCAT CTCTCACCGC TACAGCTAAA
GGTTATTTAG GCCAACAAGC AGAGACTGGT ACTTATTGCA ATTTAGCAGT GACTGCTCGG
ACTGACATAG AATGTACTCT AAAAGGTGGT AATGCAGATA AAGTTAATGG CAAAAAAATT
ACATTATCAC GAACTGCTGA CGGTGTATGG AGCTGCAAAA GTGATGTCGA TGAAAAGTTT
TTACCTAAAG GTTGTACTAC TGCATAA
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| Protein sequence | MKGLTLKTGL NHKAKGFTLI ELMIVVAIIG ILAAIALPAY QDYTIKSQIN GGLSEVSALK
NSFEVAVLDD TDPSLTATAK GYLGQQAETG TYCNLAVTAR TDIECTLKGG NADKVNGKKI
TLSRTADGVW SCKSDVDEKF LPKGCTTA
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