| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3356 |
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| Symbol | |
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| ID | 5078131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3906229 |
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| End bp | 3907512 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640500557 |
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| Product | transcriptional regulator, CadC |
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| Protein accession | YP_001184867 |
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| Protein GI | 146294443 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.36834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAAAA TCACATCATA TTTAATGTTA GATGAACAGG CTAAGGAATT AGTCGATCAT
GTGAATGGCG CAACCATCAG TCTGACATTC TCTGAAACGG CGGTATTAGT TCTGCTGTTA
TCCTCCACGA AGGCCATTTT TACTAAGGAA GAATTGCTAC AGGTAGGCTG GCCTGAAAGG
GTGGTTGCTC CTACCTCTTT AACGCAATGT ATTAGTACCT TACGTAAAAA ACTTGAACCC
TATACCGAAG TGCAACTTAA AACCGTGGCA CGCCGTGGGT ATCAGTTACA TGTGTCTGAA
CAATCCCATG TAAAAATGTT GGCCATTAAC GATGCCGATG CGATTCGCGA TGCCATAGTC
GGAGTATCCA TTTGGACAAA AGTTGCAGGC ATTTTGCTAC TGTGTGTGAT TTTAGGGGGG
ATCTGGTATG TGAGCGATCA CCACGCTGTA GTGAAACGTA TCGCGAAATG GCATGCCGAT
AAGTACATTA GTTTAAATAT TGGCGGTACA TTGGGCACAG CCCACATGCT TTATATCAGC
GGTGAGGAAC ACTTACATCC TTCGTGGTGG CAAAAATATT TGGCGCCAGA AGGCAACCAT
ATCAATAACC TCAACTATTT CAGTGCATTT GCTTCAACCG ATGGTAAAAA CTATTCGATG
GCCATTTGCC CAGAGCTGGA TGCCAAAGCC TGTAATGGCA ATGGCATCAT CAATATTACG
GCGATAGATG CAAAACCCGC TGGATTGAAT ATGGCGGAGT TTATTCCGCT CAGTAAAAAG
ATGGAGCAAC GCATTCGTTA TAACCGCATT GTGCTTCCCA TTGATGATAA GAGTTCTGGC
GAATTACTTG AGCATAATTA TCATGCCGAT ATCTATTTCC CTGTCGCGGG TGAGTTACTG
GTTCGTACCG ATCTCAGCAT GTCGCTCGTC TATGAAGGGG AGAAAAAAGG CAAATTTTAC
TCCACCTCCT GCATCACAGA TCAAGACTGT TTAACCACGC CAATTAAATA CACCATTCGG
GGGGAGTTTG AGCAATATCA AACCACTATA GATGAGTTAA AGGTCGATGT GTTTCATGTT
AAAGTGCTGC AAAAAGAACT GACAAAACCG GATGAAGTGA GCCCTTCTGC CATGCACTTT
TACCGTGAGA TCCGTAAACA TGATATCCGC GATGAAGATT TATTTTACTA CCGCGTTTAT
CAAAATGAGC ACACCGCTGT ATGGATAGTC CCTCAAATGG GACAAGTGTT GGCTTGGACT
CAGTACACCC AAGTGAAACT GTAA
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| Protein sequence | MHKITSYLML DEQAKELVDH VNGATISLTF SETAVLVLLL SSTKAIFTKE ELLQVGWPER
VVAPTSLTQC ISTLRKKLEP YTEVQLKTVA RRGYQLHVSE QSHVKMLAIN DADAIRDAIV
GVSIWTKVAG ILLLCVILGG IWYVSDHHAV VKRIAKWHAD KYISLNIGGT LGTAHMLYIS
GEEHLHPSWW QKYLAPEGNH INNLNYFSAF ASTDGKNYSM AICPELDAKA CNGNGIINIT
AIDAKPAGLN MAEFIPLSKK MEQRIRYNRI VLPIDDKSSG ELLEHNYHAD IYFPVAGELL
VRTDLSMSLV YEGEKKGKFY STSCITDQDC LTTPIKYTIR GEFEQYQTTI DELKVDVFHV
KVLQKELTKP DEVSPSAMHF YREIRKHDIR DEDLFYYRVY QNEHTAVWIV PQMGQVLAWT
QYTQVKL
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