Gene Sputcn32_3301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3301 
Symbol 
ID5078374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3848750 
End bp3850144 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content45% 
IMG OID640500502 
ProductPhoH family protein 
Protein accessionYP_001184812 
Protein GI146294388 
COG category[T] Signal transduction mechanisms 
COG ID[COG1875] Predicted ATPase related to phosphate starvation-inducible protein PhoH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAG ACGACAGAAA GTTGTTTGTA CTGGATACCA ATGTGTTACT GCATGAACCT 
TTGGCGATCT ATTCGTTTAA AGAGCACGAT GTGGTCATTC CGATGACAGT GCTAGAAGAG
CTAGACCAGA TAAAAGATCG AAAGAGTGAT GTGAGTCGGG ATGCTAGGGT GGCCATCAGG
GCGTTGGAGG ATACCCTAGG AGGTGATACC ACACCTGAGC AGATTATTAA TGGTGTACCA
CTGCCGAGTC GAGAGGGTCA TGCCGATGCT ATAGGAGCGC TCTCTATTTT CCCTGATCAC
CTTGTTGATT TTACCTTAGG CAGCTTGCCG GGGGATGGAA ACGACAACCG CATTATCAAC
ACTGCACTTC ACCTACAAAA CCTCCACCAT CCACGTACCG TCGTATTAGT CACTAAAGAC
ATTAATATGC GCCTTAAAGC CAAAGGTGCT GGCATTCAAT TAGTGGAAGA TTATCGTACC
GACCAGTTAA TTGATGATAT TCGCTTCCTC AGTAAAGGTT TTTACCAATT TGAAGGCAAT
TTTTGGGAAC ATTTAAATAA AGTTTCTACC GAGCGCCATG GCAGACATAT TATCCATGAA
GTGCCACTTA AGGATCTGGA AAACGATCAA TTTTATATTA ACCAATACCT TATCGATACA
GAGTCGGATT TTTGTGGCCG AGTCACGGGG CGTACTGATA CTCACCTACA TATCTTAGAT
TTAGGTCGTG AGCGGATGAA AAACCTTGAG GCTTGGGGGG TTAAACCGAA AAATGTCTAT
CAAGGCATGG CATTACAGGC GCTACTCGAT CCCGATATCG AACTCGTGAT TTTAACGGGT
CCCGCAGGTT GTGGTAAAAC CCTGCTTGCT ATGGCTGCAG CCCTTGAGCT TGTGGTTGAG
CGTAACCGCT ACGACAAGGT GATAGTCACC CGTAACACGC CTGAAATAGC GGAGTCTATT
GGTTTTTTAC CCGGCACAGA AGAAGAGAAA ATGATGCCGT GGCTCGCCGC CATCACAGAT
ACCTTAGAAG TGCTGCACAA GAATGATGTG AATCCCACGG GCAGTCTCAA TTACATTATG
GAAAAGGCCA ATATTCAGTT TAAGTCGATT AACTTTATGC GTGGCCGCTC GATTCAAAAC
TCAATTGTAT TATTGGATGA GTGCCAAAAT CTCACCGCTT CGCAGATTAA AACTATGATT
ACCCGTATGG GTGAAGGTAC AAAGCTGATT TGTTGCGGTA ACTTAGCGCA AATCGATTCT
AATTATTTAA CTGCCGTTAC CTCAGGGCTG ACCTACATTG TTGAGCGCTT TAAAGACTTT
GAAGGTAGTG CTAACTTGTA CCTCAATGGG GTTGTACGTT CACGTTTGGC TGAATATGCC
GAAGAACACC TTTAA
 
Protein sequence
MEQDDRKLFV LDTNVLLHEP LAIYSFKEHD VVIPMTVLEE LDQIKDRKSD VSRDARVAIR 
ALEDTLGGDT TPEQIINGVP LPSREGHADA IGALSIFPDH LVDFTLGSLP GDGNDNRIIN
TALHLQNLHH PRTVVLVTKD INMRLKAKGA GIQLVEDYRT DQLIDDIRFL SKGFYQFEGN
FWEHLNKVST ERHGRHIIHE VPLKDLENDQ FYINQYLIDT ESDFCGRVTG RTDTHLHILD
LGRERMKNLE AWGVKPKNVY QGMALQALLD PDIELVILTG PAGCGKTLLA MAAALELVVE
RNRYDKVIVT RNTPEIAESI GFLPGTEEEK MMPWLAAITD TLEVLHKNDV NPTGSLNYIM
EKANIQFKSI NFMRGRSIQN SIVLLDECQN LTASQIKTMI TRMGEGTKLI CCGNLAQIDS
NYLTAVTSGL TYIVERFKDF EGSANLYLNG VVRSRLAEYA EEHL