Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3261 |
Symbol | |
ID | 5080102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3795469 |
End bp | 3795891 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640500458 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001184772 |
Protein GI | 146294348 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTATTTGC GCCGCGATCA TCCCGCCTTG CAGGAAGAGT GGAATATAGA CACCTTTCTT AAATATTCGC ATATCAATAT CTTGTGGGAA AAGAGCGAAA CTTGGGCCTT AGATGATGTG CTTATTGAGC TTGGGTTAAC TCGCAATATT GTGCTGACCT TGGCCTGTTT TGAGCAGTCA CTGTTTGTCG CGGCAGAGCC TCACCACAAC ATGATGGCAA TTGCGCCACA ATATTGCGAA CAATATGCTC GCCAATTACA CCCTGACTTA GTCAGTCTCC CCATCCCGTT AAGTGACGAA TATCTTGATA AACTCGCCAT TCCTTTTACC TTGATTTGGC ATAAGAGAAA CAGCCACAAC CCCAAAATCA CTTGGTTGCG AAACAGGATA AAAGCGATTT ATCAGCCGCG TGCGCATGAT TAA
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Protein sequence | MYLRRDHPAL QEEWNIDTFL KYSHINILWE KSETWALDDV LIELGLTRNI VLTLACFEQS LFVAAEPHHN MMAIAPQYCE QYARQLHPDL VSLPIPLSDE YLDKLAIPFT LIWHKRNSHN PKITWLRNRI KAIYQPRAHD
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