Gene Sputcn32_3256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3256 
Symbol 
ID5080097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3787150 
End bp3788490 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content44% 
IMG OID640500453 
Productprotein kinase 
Protein accessionYP_001184767 
Protein GI146294343 
COG category[S] Function unknown 
COG ID[COG4886] Leucine-rich repeat (LRR) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGACGT TAGCGCAGTT AAGAGCAGGG CAATTACAAG GGATCACGCG TTTACAGTTG 
GTTGAAGATT TAACTGAGTT TCCGCAGGAG ATTTTTGACT TAGCCGATAC ACTCGAAATC
CTCGATTTAT CGAATAATCA ATTAAGTGCG CTGCCTCAAG ATTTGTATCG TTTATCCAAA
CTGAAGATAT TGTTTGCTTC CAATAATCGG TTTGAGCATT TACCCGAGGC TTTAGGACGT
TGTCCAAGGT TAGAGATGAT TGGTTTTAAG GCGAACCGCA TCAAGACAGT GCCTGAGGCA
TCTTTACCAT TACAAACTCG CTGGCTTATC TTAACCGATA ATCAGATCGA AACCCTGCCT
TCGGCAATGG GAGATTTACA GCGTCTGCAA AAATTAGCCT TGGCGGGCAA TTGTTTAACG
GCTTTGCCCG AGTCGATGGC TAATTGCCGT AACTTAGAGT TAGTGCGTCT TTCGGCCAAT
CAACTGCAGG CGCTACCTGC TTGGTTACTG AGCTTACCTA AGCTGACTTG GCTCGCCTTT
GCGGGTAATC CTTTTAGCCA TACTTTGGTC GATCCCCACG CCGATGTCGC GACAGTTGCT
AATGTTACCC TCGATGAACT AAAGCTGACT GATAAGCTAG GAGAAGGTGC TTCTGGTGTG
ATTTACCATG GTCAATGGTT GACTCAATCT ATGATTGAAG CGACTGGCTC GGCGCATGTT
GCTGTCAAAC TGTTTAAGGG CGAAGTGACA AGCGATGGTT ATCCCGCAGA TGAGTTAGAT
TGTTGCCTCA CCACGGGAGC TCATCCTTGC CTTATCAAGG TGGTAGCGCA CATTAGCCAA
AAAGATCAAT TGGGCTTAGT GATGGCGCTT ATTCCCGAAG AATTTCGTAA TTTAGGGTTA
CCGCCAAACT TAGACACTTG TACCCGCGAT ACCTTTACCG CGGATAGCCA ATTTAGCCTT
ACCGATATTA TAAAAATTGC ATATCAGTTA TCTGATGTTA TGGAACATAT GCATGCTAAG
CAGGTAAGCC ATGGCGATAT ATATGCCCAT AATATTGTGA TTAATAAAGA GATGAAGTTA
CTTTTTGGGG ATTTTGGTGC AGCGTCTAAT TTACGACAGT TAACCGATGT TGAACGCTTG
GCGATGGAGA AAATTGAAAT ACGTGCATTA GGCTGTTTAA TCGAAGATCT GTTGGCCTAT
GCCGATGCTC ATGTCAATCC AGCAGATTAT GCGCAGTTAA CGGCAATTAA AGAGAGGTGT
ATGGTCGCTG ATTTAGGGCT GCGTCCGAGT TTTAGTGCGG TAAAACATAC ACTTTTAAAT
GTAATACCTA GGGGGTGCTG A
 
Protein sequence
MQTLAQLRAG QLQGITRLQL VEDLTEFPQE IFDLADTLEI LDLSNNQLSA LPQDLYRLSK 
LKILFASNNR FEHLPEALGR CPRLEMIGFK ANRIKTVPEA SLPLQTRWLI LTDNQIETLP
SAMGDLQRLQ KLALAGNCLT ALPESMANCR NLELVRLSAN QLQALPAWLL SLPKLTWLAF
AGNPFSHTLV DPHADVATVA NVTLDELKLT DKLGEGASGV IYHGQWLTQS MIEATGSAHV
AVKLFKGEVT SDGYPADELD CCLTTGAHPC LIKVVAHISQ KDQLGLVMAL IPEEFRNLGL
PPNLDTCTRD TFTADSQFSL TDIIKIAYQL SDVMEHMHAK QVSHGDIYAH NIVINKEMKL
LFGDFGAASN LRQLTDVERL AMEKIEIRAL GCLIEDLLAY ADAHVNPADY AQLTAIKERC
MVADLGLRPS FSAVKHTLLN VIPRGC