Gene Sputcn32_3242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3242 
Symbol 
ID5080083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3768845 
End bp3769387 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content42% 
IMG OID640500439 
Productisochorismatase hydrolase 
Protein accessionYP_001184753 
Protein GI146294329 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1535] Isochorismate hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.300131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAAC CCGAAGAATG TGTGCTTGTC ATCGTGGATG TGCAGGGAAA ACTCGCTCAG 
ATTATGCAAG GTAGTGAACA ACTCCACCAG CAACTCCAAA CCTTAATTCA AGGCGCGCAG
TTGTTTGAAA TCCCCATTTT ATGGCTAGAG CAACTCCCAG ATAAACTCGG CGCAACTAGC
CCAGAATTAC AAACATTGCT TGAAAAAACC AACATGCCTA TCGCCAAAGC ACATTTTAGC
GGTTGGCGCT GTGATGAATT TAAGCAAGCG TTAATTCAAA CTGAACGTAA ACAAATCATC
TTGGCAGGGA TAGAAACCCA TGTGTGTGTT TATCAAACCT GCTGTGATTT ACTAGCGAAC
CAATATTTGG TGCACTTAGT CGCAGATGCT GTCTCATCAC GAAGTGAGAC TAACAAGCAA
CTCGGTATAC AAATGATGAC GAATAAAGGC GCGCTACTCA CCAATGTGGA ATCATTGCTA
TTTGAGTTAC AACACCAAGC CCAAGGTGAA CGCTTTAAGG CACTATTAAA GCTGATTAAA
TAA
 
Protein sequence
MLKPEECVLV IVDVQGKLAQ IMQGSEQLHQ QLQTLIQGAQ LFEIPILWLE QLPDKLGATS 
PELQTLLEKT NMPIAKAHFS GWRCDEFKQA LIQTERKQII LAGIETHVCV YQTCCDLLAN
QYLVHLVADA VSSRSETNKQ LGIQMMTNKG ALLTNVESLL FELQHQAQGE RFKALLKLIK