Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3242 |
Symbol | |
ID | 5080083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3768845 |
End bp | 3769387 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640500439 |
Product | isochorismatase hydrolase |
Protein accession | YP_001184753 |
Protein GI | 146294329 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1535] Isochorismate hydrolase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.300131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAAAAC CCGAAGAATG TGTGCTTGTC ATCGTGGATG TGCAGGGAAA ACTCGCTCAG ATTATGCAAG GTAGTGAACA ACTCCACCAG CAACTCCAAA CCTTAATTCA AGGCGCGCAG TTGTTTGAAA TCCCCATTTT ATGGCTAGAG CAACTCCCAG ATAAACTCGG CGCAACTAGC CCAGAATTAC AAACATTGCT TGAAAAAACC AACATGCCTA TCGCCAAAGC ACATTTTAGC GGTTGGCGCT GTGATGAATT TAAGCAAGCG TTAATTCAAA CTGAACGTAA ACAAATCATC TTGGCAGGGA TAGAAACCCA TGTGTGTGTT TATCAAACCT GCTGTGATTT ACTAGCGAAC CAATATTTGG TGCACTTAGT CGCAGATGCT GTCTCATCAC GAAGTGAGAC TAACAAGCAA CTCGGTATAC AAATGATGAC GAATAAAGGC GCGCTACTCA CCAATGTGGA ATCATTGCTA TTTGAGTTAC AACACCAAGC CCAAGGTGAA CGCTTTAAGG CACTATTAAA GCTGATTAAA TAA
|
Protein sequence | MLKPEECVLV IVDVQGKLAQ IMQGSEQLHQ QLQTLIQGAQ LFEIPILWLE QLPDKLGATS PELQTLLEKT NMPIAKAHFS GWRCDEFKQA LIQTERKQII LAGIETHVCV YQTCCDLLAN QYLVHLVADA VSSRSETNKQ LGIQMMTNKG ALLTNVESLL FELQHQAQGE RFKALLKLIK
|
| |