Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3225 |
Symbol | |
ID | 5080066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3752970 |
End bp | 3754019 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640500422 |
Product | ABC transporter related |
Protein accession | YP_001184736 |
Protein GI | 146294312 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCGTA CGCTCACCCT TCACCAAGTT CATAGTGATT ATCAGGGCCA GAAAGTGCTC AAAGGCTTAA GTTTAGATCT TGCTCAAGGA GAAATTCTTG CACTGTTAGG GCCTAGTGGC TGTGGAAAAA CGACTTTGTT AAGGGCTGTC GCTGGATTGC AGGCGATCAG TCAAGGCGAG ATTTTGATTA ATGGCAAGCT CGTGAGTGGT CAAAAGACAT TTGTGCCTAG TGAGCAACGT GGCATTGGTA TGATTTTCCA AGACTATGCA CTTTTTCCGC ATTTGACCGT AGCAGAAAAT ATCTTATTCG GTGTACCTAA GTTATCAGGG GCTCAGCGTC AATCACGTTT AGATGATATG TTAAGCCTTG TTAAACTTGA TGGTTTAGCA AAACGCTATC CACATGAATT ATCGGGTGGT CAGCAGCAGC GAGTTTCGAT TGCTCGTGCG CTGGCCTATG AGCCGCAGTT ATTGCTGCTT GATGAACCCT TTTCCAATAT CGACGCTCAA GTGCGCTACG AGATGATGGC TGAAATTCGC AGCATCTTAA AACAACGTAA TGTCAGTGCG GTATTTGTTA CTCACAGTAA GGATGAGGCG TTTGTGTTTG CTGATACTTT AGCCATATTT AATCAAGGGG TTATAGTGCA ATATGGCAGT GCTGAGGCTG TGTATGCCAC GCCAAATAGC CGTTATGTGG CTGACTTTTT GGGGAGTGGC AATTATTTAC CTGCTTCAGT AGTCGATGGG CACAGAGTTA CAACACCAAT AGGGCATTTA ACCAGTCTTA CACCTTTACC ATTTCCGAAT GAGTATCGTG GACAGATCTT CTTGAGACCG CAGCAATTGA CATTATCAGC AGATGAGCAG GGTGTTGGCA CTATTACGGA GCGACGTTTC TTAGGCACTT TTTGCCATTA TTGGGTGAAG GTTGAAGAAG CCTCCCATGC CTATTATGTG GAGGTTCGTA GCCAAATGAT GCAACTTACC ATTGGCCAAA AAGTAGGATT GACGACAGAA CCGCATTCAT TAGTGCTATT TGAATCTTAA
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Protein sequence | MTRTLTLHQV HSDYQGQKVL KGLSLDLAQG EILALLGPSG CGKTTLLRAV AGLQAISQGE ILINGKLVSG QKTFVPSEQR GIGMIFQDYA LFPHLTVAEN ILFGVPKLSG AQRQSRLDDM LSLVKLDGLA KRYPHELSGG QQQRVSIARA LAYEPQLLLL DEPFSNIDAQ VRYEMMAEIR SILKQRNVSA VFVTHSKDEA FVFADTLAIF NQGVIVQYGS AEAVYATPNS RYVADFLGSG NYLPASVVDG HRVTTPIGHL TSLTPLPFPN EYRGQIFLRP QQLTLSADEQ GVGTITERRF LGTFCHYWVK VEEASHAYYV EVRSQMMQLT IGQKVGLTTE PHSLVLFES
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