Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3220 |
Symbol | |
ID | 5080061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3747578 |
End bp | 3748048 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640500417 |
Product | arginine repressor |
Protein accession | YP_001184731 |
Protein GI | 146294307 |
COG category | [K] Transcription |
COG ID | [COG1438] Arginine repressor |
TIGRFAM ID | [TIGR01529] arginine repressor |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0168204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACGA CCAAGAATCA GGATGACCTT GTTAGAATTT TTAAGTCGAT TTTAAAAGAA GAGCGCTTTG GCTCTCAAAG TGAAATCGTC GCCGCCTTGC AAGCAGAAGG CTTTGGCAAC ATCAACCAAT CAAAAGTATC GCGGATGCTC AGCAAGTTCG GTGCTGTGCG GACTCGTAAC GCTAAGCAAG AAATGGTGTA TTGCTTACCA GCCGAGTTAG GTGTCCCCAC TGCGGGAAGC CCCTTAAAGA ATTTGGTACT CGATGTTGAC CACAACCAAG CTATGATAGT TGTACGTACC AGTCCGGGTG CTGCACAGTT AATTGCTCGT TTATTGGACT CAATCGGTAA ACCTGAAGGG ATTTTGGGGA CGATTGCTGG TGATGACACT ATCTTTATTT GTCCATCGAG TATCCAAGAT ATCGCCGATA CCTTAGAAAC GATCAAATCT TTATTCAATT ATGCAGAATA A
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Protein sequence | MQTTKNQDDL VRIFKSILKE ERFGSQSEIV AALQAEGFGN INQSKVSRML SKFGAVRTRN AKQEMVYCLP AELGVPTAGS PLKNLVLDVD HNQAMIVVRT SPGAAQLIAR LLDSIGKPEG ILGTIAGDDT IFICPSSIQD IADTLETIKS LFNYAE
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