Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3098 |
Symbol | |
ID | 5079738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3599961 |
End bp | 3600509 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640500296 |
Product | SH3 type 3 domain-containing protein |
Protein accession | YP_001184610 |
Protein GI | 146294186 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3103] SH3 domain protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000537469 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGCTAT CTCCCAACCT GCTGGCCGAA GGCCAATCCC GCTACATCTC GGATAACGTG TTTCTTTATC TTTTAAATGG TCCAAGTACA GATTATCGTA TTTTAGGTTC CATTGAAGCG GGTCAACCTG TTACCTTTTT AAATGAAACC CAAGGTGATT ATTCAAAAAT AATTGATCAC AAAGGCCGAG AAGGTTGGGT ACTTACCAAT TTAATTAGCT CGACTCAAAG TTTCCGTGAG CAAGTACCAG TCTTAAAAGA TGAATTAGCT AAAGCAAAGG CGGAATTAGC AGAGGTGTTT AATTCAAAAG ATAACCATGC TGGTGAGGTT ATCGAATTAA AAGCCAAGCT GAGTGAGCTG GAAAATACCT TGGAACAAAC AATTAAAGAA CGGGATAATT TAAAAGTCGC TGTTGATCGA AGCGCCCAAG ATGAGCGCTT CGAATTGTGG CGTCAGGGTG GATTGATTGC AGGTGCGGGG TTAATTGCGG GTATGATTTT AGTCTATCTC CCCAGACCAC AACGTCGTAA TAAAAAGCGT TGGATGTAA
|
Protein sequence | MLLSPNLLAE GQSRYISDNV FLYLLNGPST DYRILGSIEA GQPVTFLNET QGDYSKIIDH KGREGWVLTN LISSTQSFRE QVPVLKDELA KAKAELAEVF NSKDNHAGEV IELKAKLSEL ENTLEQTIKE RDNLKVAVDR SAQDERFELW RQGGLIAGAG LIAGMILVYL PRPQRRNKKR WM
|
| |