Gene Sputcn32_3098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3098 
Symbol 
ID5079738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3599961 
End bp3600509 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content41% 
IMG OID640500296 
ProductSH3 type 3 domain-containing protein 
Protein accessionYP_001184610 
Protein GI146294186 
COG category[T] Signal transduction mechanisms 
COG ID[COG3103] SH3 domain protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000537469 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCTAT CTCCCAACCT GCTGGCCGAA GGCCAATCCC GCTACATCTC GGATAACGTG 
TTTCTTTATC TTTTAAATGG TCCAAGTACA GATTATCGTA TTTTAGGTTC CATTGAAGCG
GGTCAACCTG TTACCTTTTT AAATGAAACC CAAGGTGATT ATTCAAAAAT AATTGATCAC
AAAGGCCGAG AAGGTTGGGT ACTTACCAAT TTAATTAGCT CGACTCAAAG TTTCCGTGAG
CAAGTACCAG TCTTAAAAGA TGAATTAGCT AAAGCAAAGG CGGAATTAGC AGAGGTGTTT
AATTCAAAAG ATAACCATGC TGGTGAGGTT ATCGAATTAA AAGCCAAGCT GAGTGAGCTG
GAAAATACCT TGGAACAAAC AATTAAAGAA CGGGATAATT TAAAAGTCGC TGTTGATCGA
AGCGCCCAAG ATGAGCGCTT CGAATTGTGG CGTCAGGGTG GATTGATTGC AGGTGCGGGG
TTAATTGCGG GTATGATTTT AGTCTATCTC CCCAGACCAC AACGTCGTAA TAAAAAGCGT
TGGATGTAA
 
Protein sequence
MLLSPNLLAE GQSRYISDNV FLYLLNGPST DYRILGSIEA GQPVTFLNET QGDYSKIIDH 
KGREGWVLTN LISSTQSFRE QVPVLKDELA KAKAELAEVF NSKDNHAGEV IELKAKLSEL
ENTLEQTIKE RDNLKVAVDR SAQDERFELW RQGGLIAGAG LIAGMILVYL PRPQRRNKKR
WM