| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3091 |
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| Symbol | |
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| ID | 5079731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3593033 |
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| End bp | 3593722 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640500289 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_001184603 |
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| Protein GI | 146294179 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0777554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGCATTC TGAATAAAAT TTTAACAGCG TTTCGCGGTG GTGCCACCGA AGTTGGCCAA
AGCATCGTTG ACGCAAACTC AACCCGTATT TTCGAGCAGG AAATCCGTGA CGCCGAAAAA
CACTTAACCA ACGCTAAACG CGAACTGACC GATGTGATGG CAAAAGAAAT GCAGGCCAGT
CGTGAAATCG ATCGTTTGAA GCGTTCTATT GCTGAACACG AAGGCTATGC AACTCAAGCG
CTGGATAAAG GTAATGAACC TCTTGCGATT GAAATTGCAG AGAAGATTGC ACAGTTGGAT
CAAGAGTTAT CCGAGCAACA AAGTGCAAAC GATAGCTTTA GCGCCCATGC CGCACGCTTG
AAAGATTTAG TGAAAAAAAC TGAACGTCAG TTGTCTGATT ATCAACGTCA GTTGAGCATG
GTTAAAACCA CTGAAAGCGT TCAAAAAGCC ACGGCAACGA TTACCGACTC TTTTGCTTCA
AGCAACTCTA AACTGCTGAA TGCAAAAGAT TCATTAGAGC GTATCAAAGC ACGTCAACAA
CAGTTTGATG ACAGGCTAAA AGCCGCAGAA ACTTTAGCTG AAGAAAGCAG CGATAAATCA
CTGCAAGCTA AGTTAGCTGA AGCTGGCATC GGTGAGCAAA AATCCAATGC AAATGCAGTA
CTTGACAGGA TCAAGGCTCG CAAAAGCTAA
|
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| Protein sequence | MGILNKILTA FRGGATEVGQ SIVDANSTRI FEQEIRDAEK HLTNAKRELT DVMAKEMQAS
REIDRLKRSI AEHEGYATQA LDKGNEPLAI EIAEKIAQLD QELSEQQSAN DSFSAHAARL
KDLVKKTERQ LSDYQRQLSM VKTTESVQKA TATITDSFAS SNSKLLNAKD SLERIKARQQ
QFDDRLKAAE TLAEESSDKS LQAKLAEAGI GEQKSNANAV LDRIKARKS
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