Gene Sputcn32_3050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3050 
Symbol 
ID5079792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp3533593 
End bp3534651 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content50% 
IMG OID640500248 
Productpeptide chain release factor 2 
Protein accessionYP_001184562 
Protein GI146294138 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGAGCG TACGCAGCTT CTTAGGGGGT ATCTTTGACT ACGATGCTAA ACATGAGCGT 
CTAGAAGAAG TTACCCGTGA GCTTGAAAGT TCCGATGTGT GGAACGAGCC TGAGCGCGCC 
CAAGCCCTAG GCAAAGAGCG TGCAAGCCTC GAAGCCGTAG TAAAAACAAT CGACGATATG 
GACTCAGGTC TTGAGGATGT CGAAGGGCTA CTCGAGCTGG CCGTTGAAGA AGAAGACGAA 
GACACCTTCA ATGAAACCAC CAAAGAGCTG GATTATTTAG AAAGTCGCCT TGCTGATCTT 
GAATTTCGCC GTATGTTCTC TGGTCCACAG GATGCCTCAA ACTGTTACTT AGACATTCAG 
TCGGGCAGTG GCGGTACTGA GGCTCAAGAT TGGGCCAACA TGGTACTGCG TATGTACCTG 
CGTTGGGGTG AAGCCCATGG ATTCAGCCCT GAATTGATGG AAGTGACCGA TGGTGACGTT 
GCGGGCATTA AGGGTGCGAC CATTAAATTC ACTGGTGAAT ATGCTTTCGG TTGGTTACGC 
ACCGAAACTG GCGTGCACCG TTTAGTGCGT AAATCGCCAT TTGACTCTTC GGGTCGTCGC 
CACACGTCTT TCTGCTCGGT ATTTGTTTAC CCTGAGATTG ATGATGATAT CACCATCGAT 
ATCAACCCTG CTGACTTACG TATCGACGTA TACCGCGCCT CGGGTGCGGG TGGTCAGCAC 
GTTAACCGAA CCGAATCAGC GGTACGTATT ACCCACTTAC CGACCAACAC GGTAGTGCAG 
TGTCAGAACG ATCGTTCACA GCACAAGAAC AAAGATTCGG CGATGAAACA GTTAAAAGCC 
AAACTGTTCG AATTAGAAAT GCATAAGCAA AATGCTGAAA AGCAAGCGGC CGAAGACGCT 
AAATCTGACA TCGGCTGGGG CAGCCAAATT CGGTCCTATG TATTGGACGA TTCCCGTATT 
AAAGACTTAC GTACTAGCGT GGAGACGCGC AATACCCAAG CGGTACTCGA TGGCGATCTG 
GACAAGTTTA TCGAAGCCAG TTTGAAATCA GGGCTGTAA
 
Protein sequence
MPSVRSFLGG IFDYDAKHER LEEVTRELES SDVWNEPERA QALGKERASL EAVVKTIDDM 
DSGLEDVEGL LELAVEEEDE DTFNETTKEL DYLESRLADL EFRRMFSGPQ DASNCYLDIQ 
SGSGGTEAQD WANMVLRMYL RWGEAHGFSP ELMEVTDGDV AGIKGATIKF TGEYAFGWLR 
TETGVHRLVR KSPFDSSGRR HTSFCSVFVY PEIDDDITID INPADLRIDV YRASGAGGQH 
VNRTESAVRI THLPTNTVVQ CQNDRSQHKN KDSAMKQLKA KLFELEMHKQ NAEKQAAEDA 
KSDIGWGSQI RSYVLDDSRI KDLRTSVETR NTQAVLDGDL DKFIEASLKS GL