| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3041 |
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| Symbol | |
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| ID | 5079783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3521940 |
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| End bp | 3523664 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640500239 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001184553 |
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| Protein GI | 146294129 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTGACT TGTGGCAATT AGCGATTATT TTGATAGGGC TTGTGGCTGG CTTAATTAGC
GGCCGTATCA ACCCAGCGGT ATTGTTTTTA TTTGCATTTT TGCTCTGTTA TCTCTTGGGC
ATGGTTGCGC TCGATACCGC ATTAACAAGC TTTACCAATA TTGGCTTAGT CACACTTGTC
CTGTTGGTGT TGGCCGCGAC GGCGTTAGAA AAAACGTCCT TGCTGGGAAA GTTGAGTCAA
GTCATAGGTA ATAGTTCTTT GCCTATGACA ATGGCAAAAC TCGGTTTTTC GACGGCTTTG
CTGTCGTCTT TCACTAACAA CACTGCGGTG GTGGCATCGC TTATCGGTGT TGTGCGCCGC
AATCAGGCAC ACGCGCCAGC TAAGCTATTG TTGCCACTAA ATTATGCGGC AATTTTAGGC
GGCACACTGA CCCTGATTGG TACCTCGACT AACCTGATTG TGAACTCCTT TGTAGAAAAC
GCTGGTTTAC CCGCCTTAGG GTTCTTCGAG TTTACGCCGG TGGCTGTGAT TATTTTAGTG
GCTGGAATGC TGTTACTGAC CTTACTGGCG AATATTCTGC CTGATAGAAG AGAAGATTCA
AACGAAGAAA CGCTACCTTA TTTGCTCGAA GCCCATGTGG CGAAAGGTTC GTCCTTGGTT
GGTCGCAGTG TGGTGGATAA CAAACTTAGG GCGCTGAAAA AGTTATATCT CGTTGAATTA
GAACGCAGTG GCATTTGTAT TTGCCCTGTG CCGCCCCAGT TAGTATTACA AGCGGACGAC
GTGCTGCGTT TCAGTGGCGC GGTGGAATCG GTCGAGTTAT TACACCAATT CGATGGTTTA
GATTGGTTTG GTAAGCATCA AGCTAAGGGA CAAAATTTAG TTGAAGCCGT ACTCGCGCCA
TCATCTCGTT TAGTGGGCAG TTCGTTAAAA GCAACGCGTT TTCGTGAGCA ATTTGATGCA
GCTGTGATGG CAATTCGCCG CGGAAATCAT CCACTAAAGG GTGGGCTTGG TGACATAATC
CTGCAACCCG GTGATGTGTT GTTATTGACA CCAGGTGATG GTTTTAGCAA TAGCGCAAAG
CTAAGTTCAG AGTTTGCGGC GATCAGCGGT TTAGATTTGA ATGTGCGTTT AGACAGTCGT
CGTGGTCGCT GGGTATTGCT GGGGTTTGCG GCAACGATCG TCCTGAGTGT TACTGACGTA
TTGCCATTGG CTAAAGGTTT AGTGATATTG CTGCTGAGTT ATTTTGCCAT CGGTGCTGTC
ACACTGTCTG AGCTGAAACG CCGTTTTCCA TTTGAACTTG TCATCATCGT TGGCAGTGCA
CTTGGTCTTG CTAATTTGAT GATGAGTACT GGCCTTGCGA ACAACTTAGC CCAAGGATTA
TTGAGTGTAA TCAATGGTTA TGGGGTCTTT GGTGCCTTTG TAGGTGTGTA TTTTATGACC
TTGTTACTGA CTGAACTGGT GACCAATAAC GCACCGGCAG CGCTGGCGTT CCCTATTGCC
TACGCGATTG CGCTTAATTA TGGTGTCGAT GCAAGACCCT TTATTATGGC GGTCGTCTTT
GGTGCCAGTG CGAGCTTTAT TTCACCCTAT GGCTATCAAA CGAACTTAAT GGTGTTTAAT
GCGGGTAATT ATCGCTTCAG TGACTTTGTC CGCCTTGGAT TGCCGTTATC TGTACAGTAT
TCCCTGATAG TGATATTTAT GGTGCCGATC ATCTTTCCAT TTTAG
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| Protein sequence | MSDLWQLAII LIGLVAGLIS GRINPAVLFL FAFLLCYLLG MVALDTALTS FTNIGLVTLV
LLVLAATALE KTSLLGKLSQ VIGNSSLPMT MAKLGFSTAL LSSFTNNTAV VASLIGVVRR
NQAHAPAKLL LPLNYAAILG GTLTLIGTST NLIVNSFVEN AGLPALGFFE FTPVAVIILV
AGMLLLTLLA NILPDRREDS NEETLPYLLE AHVAKGSSLV GRSVVDNKLR ALKKLYLVEL
ERSGICICPV PPQLVLQADD VLRFSGAVES VELLHQFDGL DWFGKHQAKG QNLVEAVLAP
SSRLVGSSLK ATRFREQFDA AVMAIRRGNH PLKGGLGDII LQPGDVLLLT PGDGFSNSAK
LSSEFAAISG LDLNVRLDSR RGRWVLLGFA ATIVLSVTDV LPLAKGLVIL LLSYFAIGAV
TLSELKRRFP FELVIIVGSA LGLANLMMST GLANNLAQGL LSVINGYGVF GAFVGVYFMT
LLLTELVTNN APAALAFPIA YAIALNYGVD ARPFIMAVVF GASASFISPY GYQTNLMVFN
AGNYRFSDFV RLGLPLSVQY SLIVIFMVPI IFPF
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