| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2979 |
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| Symbol | |
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| ID | 5079874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3456295 |
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| End bp | 3457152 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640500179 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001184493 |
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| Protein GI | 146294069 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTTG ATAAAGACAA ACCTCATCAC TCAGGCATTC GATATAACCA CTATAAATTG
ATGGGGTTAA TGGCGCTTTG CAGTTACCAA ACCGGCAACA CAGCCGAGCT GAGTATTGGC
GTTAGCCTCT CTATTCCTCC TTATGTTATT CAAGAAACTA ACAGTGGACT CGAACTCGAA
TTACTCTACC AAGCACTCGC GGTTAAGGGA CATAATGCCA TCATCCACTA CCTTCCTTTG
GCGCGTACAT TTCATGAGCT AAAAGAAGGC AAACTCGATG GTATTATCAA TATAAAAGAA
GGCATGTTAG ATAATGTCTT TTATTCTGAT GTGGTCATTA GCTATCAAAA CTGTGCCATT
AGCCTCGAAT CAAATCGATT TAATATCAAT AGCATAAGTG ATTTAAGTGA CAAACAAGTC
GTCGCTTTTC AGCGTGCATC AAGCATGTTA GGAGAAGAGT TTGGCCAAAT GGCTAAAGCC
AATACTGGCT ATAAAGAACA AGCTCGACAA CTACAACAGG TTTATATGTT GATGAAGCAT
AGAGCCGATG TGGTGGTGAT GGATAAAAAT ATTTTTAAAT ACTATTTAAA GCAGGCTTAT
CTGGATGGGC GATTGAACAG CAAGGAATTA CAACAACAAG CCATTTGCCA CAAAGTATTC
CCCCCGACTG AATATCGTTT TGCGTTTCTG AGCGCACAAA TTCGGGATGA TTTTAATGCG
GGTCTTAAGC ACATTACCCA AGACGGTAGC TTGCAAGCAT TACAGGAAAA ATACCGCCGC
CTCATGTCCC TAGAACATGA AGCGGAGGCA TCAACCAAAA TAATAGAACG TAACCCCATC
GGAAATGATG CGCTCTAA
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| Protein sequence | MTLDKDKPHH SGIRYNHYKL MGLMALCSYQ TGNTAELSIG VSLSIPPYVI QETNSGLELE
LLYQALAVKG HNAIIHYLPL ARTFHELKEG KLDGIINIKE GMLDNVFYSD VVISYQNCAI
SLESNRFNIN SISDLSDKQV VAFQRASSML GEEFGQMAKA NTGYKEQARQ LQQVYMLMKH
RADVVVMDKN IFKYYLKQAY LDGRLNSKEL QQQAICHKVF PPTEYRFAFL SAQIRDDFNA
GLKHITQDGS LQALQEKYRR LMSLEHEAEA STKIIERNPI GNDAL
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