| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2977 |
|---|
| Symbol | |
|---|
| ID | 5079872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 3454149 |
|---|
| End bp | 3455438 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640500177 |
|---|
| Product | xanthine/uracil/vitamin C permease |
|---|
| Protein accession | YP_001184491 |
|---|
| Protein GI | 146294067 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2252] Permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGAAA AGCTGTTCAA ACTAAAACAA AATCAAACGA GCCTCAAGCA GGAAGCTATT
GCAGGTTTAA CCACATTTAT GACGATGGCC TACATCATTT TTGTCAATCC AATGATGTTA
GCCGATGCAG GCATGGACCA CGGGGCAGTA TTTGTTGCCA CCTGCCTTGC AGCAGCAATT
GGTTGTTTAG TCATGGGATT AATGGCTAAT TATCCGATTG CATTAGCACC GGGAATGGGG
CTTAACGCCT TTTTCACTTA CACGGTTGTG GGTGAAATGG GTTATAGCTG GGAGACAGCC
TTAGGTGCCG TGTTCCTATC GGGAATTTGC TTTTTAATCT TGTCCTTAGT GCGTATTCGT
GAATGGATTG TTAACAGCAT TCCCGTGTCG TTACGCCTAG GTATTGCCGC TGGTATTGGT
TTATTTCTTG CGCTGATTGG TCTTAAAAGT GCGGGCATTG TTGTTGCTAA TCCTGCGACC
TTAGTCACTA TGGGTGATAT TACTACTTTT CCGGCTGTAA TGGCGGTATT GGGCTTTTTC
CTGATTATTG CCATGGTGCA AAGGGGAATG AAGTCGGCGG TAATTTTAAG TATCTTAATT
ATCACCGGAC TTGGATTGAT CTTTGGTGAT GTGCATTACA ACGGCATTGT GTCTATGCCG
CCTTCAATTG CTCCGACCTT TATGAAGATG GATTTATCCC AAGTCTTTGA AGTCACTATG
CTATCAGTCG TGTTTGCCTT CTTGTTTGTG GATTTATTTG ATACATCAGG CACCTTAGTG
GCGGTTGCCC AACGCGGTGG TTTTCTCGAT GAGAAAGGTC GTTTACCTCG TTTAAATCGT
GCTTTGACCG CAGACAGTTT AGCCACTATC GCAGGTGCCG CTTGTGGTAC TTCAACTACG
ACAAGCTATA TCGAAAGTAC CGCGGGAGTG AGTGCGGGAG GGCGTACAGG ATTAACCGCT
GTGGTGGTGG GGTTATTGTT TATTGCTGCA TTGTTCCTAT CGCCATTGGC GGGGATGATC
CCGGCCTATG CAACAGCGGG TACCCTGTTT TATGTGGCTA TTTTAATGAT GTCTGGACTG
GTGCATGTCG AATGGGAAGA TTTAACCGAA GCCGCGCCTG TGGTGGTTGT GTGCATCTTA
ATGCCGCTGA CGTTCTCTAT TGCATCGGGG ATTGCGCTGG GGATTATCTC CTATGCGGCG
ATTAAAATAC TCACGGGTCG CTTTAGCGAT CTCAATGTGG GTATCATCGT GTTAGCGGCA
TTGTTTGTGG CTAAGTTTGT CTATGCTTGA
|
|---|
| Protein sequence | MLEKLFKLKQ NQTSLKQEAI AGLTTFMTMA YIIFVNPMML ADAGMDHGAV FVATCLAAAI
GCLVMGLMAN YPIALAPGMG LNAFFTYTVV GEMGYSWETA LGAVFLSGIC FLILSLVRIR
EWIVNSIPVS LRLGIAAGIG LFLALIGLKS AGIVVANPAT LVTMGDITTF PAVMAVLGFF
LIIAMVQRGM KSAVILSILI ITGLGLIFGD VHYNGIVSMP PSIAPTFMKM DLSQVFEVTM
LSVVFAFLFV DLFDTSGTLV AVAQRGGFLD EKGRLPRLNR ALTADSLATI AGAACGTSTT
TSYIESTAGV SAGGRTGLTA VVVGLLFIAA LFLSPLAGMI PAYATAGTLF YVAILMMSGL
VHVEWEDLTE AAPVVVVCIL MPLTFSIASG IALGIISYAA IKILTGRFSD LNVGIIVLAA
LFVAKFVYA
|
|---|
| |