| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2796 |
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| Symbol | |
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| ID | 5080769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3247221 |
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| End bp | 3248111 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640499990 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001184314 |
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| Protein GI | 146293890 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGATC TTCATTGGTT AAAGACTTTT GTCACTTTGG CTGAATGTAA GCATTTTGGT
AAGGCAGCCG CTGTGCTACA TATGACTCAG CCCAATGTTA GCTTGCATAT CAAGCAGTTA
GAGCAAACCA CTCGGGTAAA GTTGATTGAC CGTAATCCCT TTCGATTGAC ACAGGCGGGG
TTTCGTCTGT TAGAAAGCAG CCAAAAAACT CTGATGGAAT TACAAATTTG CCAGGCGGAT
TTGAATGCAA TTAACGATCT TAGCCAAGGC ACTCTCACCA TAGCAGCGAG CGATATTATC
TCGCGGTTAC TCTTGATCCA ACCGTTTCAG CTCTTTAAGG CGGAGTTCCC AGGAATTGAC
TTTTCACTGC TTAATACCAC GTCTTCACAG GCCTCTGAGT TAGTGACCAA TGCTGAAGCC
GATTTAGGCT TTGTGATCGC GCAAAAGGAG AGTCAACCAC TGCATTTTAC TGAATTACAA
CAGATTAAAT GGTGCGCCAT CGGTGACCAT TTGCAGCAAT GGCAGCAAAC AAAACTGTCC
GTGGATACAC CCTTAGCCGA GCAACCGACC TTGATTTTAT TAGGCCATGA TACGCGAACC
CGCGAGTTAT TGGACCCTGC GCTACCTTCC TTGAACTTAC CCAATTATAG GATTATGGAA
GTTGGCAGTG TTGACGCACA AATCGATTGG GCAGAGGCGG GATTTGGGGT AGCGATAGTG
CCAGAGTTTT CTGTATATAC GAAAGCGAAT TTGACCACGA AAGTCACCCC TTTGCCGCAA
TTCCCTACAA CGAGTTTAGG TTATATTGTG CGTCAAAATC AGATCTTGTC GAAAGCTATC
AAGCAGTTGT TATATTGGGT GAATCAAGAA ATTATTCGCT CGCAGCGATA G
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| Protein sequence | MLDLHWLKTF VTLAECKHFG KAAAVLHMTQ PNVSLHIKQL EQTTRVKLID RNPFRLTQAG
FRLLESSQKT LMELQICQAD LNAINDLSQG TLTIAASDII SRLLLIQPFQ LFKAEFPGID
FSLLNTTSSQ ASELVTNAEA DLGFVIAQKE SQPLHFTELQ QIKWCAIGDH LQQWQQTKLS
VDTPLAEQPT LILLGHDTRT RELLDPALPS LNLPNYRIME VGSVDAQIDW AEAGFGVAIV
PEFSVYTKAN LTTKVTPLPQ FPTTSLGYIV RQNQILSKAI KQLLYWVNQE IIRSQR
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