Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2716 |
Symbol | |
ID | 5079931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3140862 |
End bp | 3141815 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640499902 |
Product | hypothetical protein |
Protein accession | YP_001184234 |
Protein GI | 146293810 |
COG category | [S] Function unknown |
COG ID | [COG3272] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATAAGT TTAACCCGCA GCGAATTCAG ATTGGGATCA GTGCTTGTCT ATTGGGAGAA AAAGTTCGCT TCGATGGGGG GCACAAAAAT TCTTCCTATT GTAATCAAGA GATTAAAAAT TTTTTTGATT ATGTTCCCAT TTGTCCTGAG ATGGCGATTG GTCTAGGTGC ACCTCGTAAA AGCATACGTT TAGTGCGTGA TGGTGAAACC ATACTTGTTC AAAGCGGCGA TGGTAGCTTA GATGTCACCG ACAGACTGAA TGCTTACAGT GAAAGCAAAG TACAAGAGCT AGATTTTTTA GGGGGATACT TGCTCTGTGC TAAATCGCCT ACATGCGGTA TGGAACGGGT GACTGAGTAC AAAATAGGCA CGAATAACGG CACAAAATCG GGTATCGGTG TGTTTGCTCG CAAGTTAATG GAGCGTTATC CATTACTACC CGTGGAGGAG GAGGGGCGCT TACACGATAT GGTATTACGG GAAAACTTTT TTACCCGCGT TTATGCCTAT CACGATTGGC ACCAAATGAA GCACGAAGGA TTAACTAAGC ATAAATTGGT TAAGTTTCAC TCCCGTTATA AATATCTGCT CATGGCCCAC AGCCCTAAAT GGTATCGCGA GCTAGGACCT ATTATTGCCA ATATTGACGA TCTTGAAACC AGTGCGACTC GCTATTTTGA AGGCTTTATG ACGGCACTTA AAATTAATGC GACCCGTAAG AATCACACCA GCACGTTACA GCATATTCAA GGTTATTTTA AAAAGCATTT GAGCAAAGAG CAAAAGACAG AACTATCTGA AGCGATTATG AAATATCGAC AAGGCTTCTT GCCATTATTG GTGCCTATTA CCTTGATAAA TCATTATCTG CGGGAATTTC CAACCCCCTA TATTGAAGAC CAAGTGTATT TGAATCCTCA TCCTGAGGCG TTAAAACTGC GTTACGCATA TTAA
|
Protein sequence | MYKFNPQRIQ IGISACLLGE KVRFDGGHKN SSYCNQEIKN FFDYVPICPE MAIGLGAPRK SIRLVRDGET ILVQSGDGSL DVTDRLNAYS ESKVQELDFL GGYLLCAKSP TCGMERVTEY KIGTNNGTKS GIGVFARKLM ERYPLLPVEE EGRLHDMVLR ENFFTRVYAY HDWHQMKHEG LTKHKLVKFH SRYKYLLMAH SPKWYRELGP IIANIDDLET SATRYFEGFM TALKINATRK NHTSTLQHIQ GYFKKHLSKE QKTELSEAIM KYRQGFLPLL VPITLINHYL REFPTPYIED QVYLNPHPEA LKLRYAY
|
| |