Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2684 |
Symbol | |
ID | 5079995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3112027 |
End bp | 3112566 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640499866 |
Product | glutathione peroxidase |
Protein accession | YP_001184202 |
Protein GI | 146293778 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0386] Glutathione peroxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.553323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAT TCACTCTAAT ATTAGCAGCG ACAGCAAGCA TCATCAGTGC GGGAGCCATG GCCGCCACTT GCCCAAATTA TCTCGATCTG GAAGTACGTA AATTACATTC AGAGGATAAA ATTAATCTGT GTGAGTTGAC TCAAGGTAAA CCCGTATTGA TCGTCAATAC TGCCAGTAAC TGTGGCTATA CCTCACAGTT TAAATCCCTA GAAGCAATTA ATAAGGAATA TAAAGACAAA GGATTAGTTG TGATAGGTTT CCCATCGGAT GATTTTTTTC AAGAAGAAAA TGATGAGAAA GACACGGCGA AGGTATGTTA CATCAATTAT GGTGTGACTT TTACTATGTT GGCCACATCG CCGGTCCGAG GAAATGATGC AAACAGTGTA TTTAAATACT TGGCCGAAAA AACGGGTGCG CCAAAGTGGA ATTTCTATAA GTATGTTGTC AGTGGTGACG GTACAGTTGT ACAGCAGTTC AATTCAAAAG TGAAACCCGA TAGTGCCGAA CTTAAACAGG CTATTGAATC GGTTCTTTAA
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Protein sequence | MNKFTLILAA TASIISAGAM AATCPNYLDL EVRKLHSEDK INLCELTQGK PVLIVNTASN CGYTSQFKSL EAINKEYKDK GLVVIGFPSD DFFQEENDEK DTAKVCYINY GVTFTMLATS PVRGNDANSV FKYLAEKTGA PKWNFYKYVV SGDGTVVQQF NSKVKPDSAE LKQAIESVL
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