| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2658 |
|---|
| Symbol | |
|---|
| ID | 5079969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 3089861 |
|---|
| End bp | 3090754 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640499842 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001184178 |
|---|
| Protein GI | 146293754 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCCAG CCATTAGCCT TGATGGATTA ATTGTGCTCG ATGCGATTGA TAAAAAAGGG
AGTTTTTCAG CAGCGGCAGA ATCGTTATTT CGAGTACCTT CTGCCTTAAC CTATACAGTA
CAGAAACTTG AAGGCGATTT AGGTGTAAAA CTATTTGAAC GTAAGGGACA AAGAGCTGAA
CTGACACTAG TCGGTCAATT AGTATTGCGT CAAGGTCGGG AGATCCTTGC TGCCACATCA
AGGCTTGAAG AGGCAGTACG CCAATTGGAA ACGGGCTGGG AGTCTTCCTT AACCTTAGCG
ATAGATACTG TTGTACCGAT TTCTCCTTTA TTGCAGCTTA TTGGTGAGTT TACGGAGTTG
GGTAAACAAG TCACGGTGAA TATTAGTGAA GAGTCCTTAG GTGGAGGTTG GGACGCGCTC
TATTCAGGGC GAGCTGATAT TGCTATCGGC GTTACTGGGG AACTGCCAAA AGGACAATAT
CATTTGGTTG AAATTGGCCA TCTTGAGTTT GTATTTGCAC TTAATCCAAC CCATCCCTTG
GCTTTGTATA AGTTGCCGAT ACCGACTGAG GCGCTGTTAC AGTTTCCATC TATAGTGGTT
GCGGATAGTT CTATGGCATT AGCACAGCGT TCAAGTGGTT TATTCGATAG TCGACAAGTG
ATTCGAGTAC CCAATATGCA AACTAAGATT AAAGCGCAGC AATTAGGCTT AGGCGTCGGA
TATATTCCTG CGCACCTTAT TACTAAAGAA CTGGCATCGG GTGATTTGAT TGCCTGTGCA
GTCGAGATCC CCCGCCCTGC ACAGAAGGTA TTTTTGGCAT GGCGCAAGGG CAATCAAGGT
AAGGCGCAAG CTTGGTTTGC CGAGCGGTTA CCCCATTGTG AATGGCTGTT TTAA
|
|---|
| Protein sequence | MLPAISLDGL IVLDAIDKKG SFSAAAESLF RVPSALTYTV QKLEGDLGVK LFERKGQRAE
LTLVGQLVLR QGREILAATS RLEEAVRQLE TGWESSLTLA IDTVVPISPL LQLIGEFTEL
GKQVTVNISE ESLGGGWDAL YSGRADIAIG VTGELPKGQY HLVEIGHLEF VFALNPTHPL
ALYKLPIPTE ALLQFPSIVV ADSSMALAQR SSGLFDSRQV IRVPNMQTKI KAQQLGLGVG
YIPAHLITKE LASGDLIACA VEIPRPAQKV FLAWRKGNQG KAQAWFAERL PHCEWLF
|
|---|
| |