Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2624 |
Symbol | |
ID | 5080677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3043808 |
End bp | 3044407 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640499808 |
Product | hypothetical protein |
Protein accession | YP_001184144 |
Protein GI | 146293720 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTGGGAG TTTGTATAAC ACTATTGTGT GGCAAACTCG AAAACTCATA CCGCATAGAG TTGAGAATTA AATTGAATAA TTATGGTGTA GAACTTCGCG CTGTCGAAAT GTGTGATTTA CCGCTACTTA GACGTTGGCG TAATCGAGAT GATATTCGTT TACAGATGAT GCAAACGGAC TATATATCAC CGAATCAACA ACGCAACTGG TTTGAAAGTA TTCAATATCG GAATGACCAA CAGCATTGGG TTTTATGGTG TAAAGGACAA CGAGCAGGCT ATGTCAATTT AAAAGGGAAT ATTTCTGGTG AATTATTTGG GCAAGATCTT GCTGACGCAG GAATTTATTT AGGTCCGTCA CCAGTACGTC ACCCAATGCT TGCGGTAGCA GCTGCATTGT CACAATTAGA TTTTGGGTTT GAAACTTTAC AAATCAAGGC GATAAGAACA TTAGTGAAAA CCGATAACCA CTCTGCTTTA AGGCTCAATC AGCAGTTAGG CTATCAAGTA TTGTTGAATA AACAAGATTT TATCGCATTA GAATTACTTC CAAGTGATTA TTTTATTGCA CGTGAAAAAT TGCGGAGATT TTTTAGATGA
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Protein sequence | MLGVCITLLC GKLENSYRIE LRIKLNNYGV ELRAVEMCDL PLLRRWRNRD DIRLQMMQTD YISPNQQRNW FESIQYRNDQ QHWVLWCKGQ RAGYVNLKGN ISGELFGQDL ADAGIYLGPS PVRHPMLAVA AALSQLDFGF ETLQIKAIRT LVKTDNHSAL RLNQQLGYQV LLNKQDFIAL ELLPSDYFIA REKLRRFFR
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