Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2450 |
Symbol | |
ID | 5078584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2839406 |
End bp | 2840581 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640499618 |
Product | major facilitator transporter |
Protein accession | YP_001183970 |
Protein GI | 146293546 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.144004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAACTT CTTCTAGCAC AAGCCAGCAA TTGCGCTGGC TTTGTGCCTG CTATTTTTTC TTCTTTTCTA TTCTCGGTAC TATGGTCCCT TATCTTGGGG TCTTCTTCGA AAATCGCGGT TTTAATCCTC AAGAAATTGG CTTTCTACTC GCTATCCTGA TGGCGACGCG CATCGTTGCG CCGAATGTGT GGGCTAAAGT GGCTGACCGA ACGGGGATGC GCGCCGAGCT GATCAAAATG GGCGCGGGAG CCGCCGCGCT GGCGTATTTG AGTTTCTTCT ATCATGGCGG TTTTGTGTAT ATGGCGCTGA GTTTGGCCCT CTATACTTTC TTTTGGAATG CGATCCTCGC TCAGCTTGAA GTGATCACCT TAGAAACCTT AGGCGAGAAT GCCAGTCGCT ACGGTCAAAT ACGCAGTTTT GGCAGTATAG GTTTTATCTG CCTTGTGGTG GGTGCGGGCT TTGCTATCGG CCAGTGGGGC ACCGAAGTGT TGCCTTATAT CGGCTTGACA TTATTTACCG GGATGCTGCT TAGCGCGTTG CCGCTACCCG CCAATCGAGC GGTGCGCCCC GCGGGGCAGG AGCGGCACCG CCTTAAATGG ACTAAGCCAA TTGTGTGGTT CATGATTTCC GCTATGTTGT TGCAAATGAG CGCAGGGCCT TTCTACGGCT TCTTCGTCTT ATATTTAAAG CAAGCAGGTT ACTCGGAATC CTCGGCGGGC ATATTTGTCG CCCTTGGCGC TATGGCTGAA ATTGTGATGT TTATGTTCGC GCCGCGTTTA CTCGGCCGCT ATGGCGTGAA TACCTTATTG ATTGTCAGCA TTGGCATGAC TTGTCTACGT TGGTTATTGG TTGCCTTTGG GGTCGATAGC GTATTGTGGC TTGGTTTTAG CCAATTATTA CATGCCTTTA CCTTTGGCTT AACCCACGCC GCATCGATTC AATTTGTGCA TAAACATTTC GATGCGAGCC ACAGAAGCCA AGGTCAAGCC CTATACGCCA GTTTAAGTTT TGGGGTTGGC GGCGCGCTCG GTACTTGGAT CTGTGGCTAT ATTTGGGGCG ATGGTAGCGG GGCGGTTTGG TCTTGGGTAT TTGCCGCAGT ATGCGCCTTT GCCGCTATGC TGGCGGTATT CTTTATCCCT AAGGATAAAC CGGGTGTTGC AGCCCATACG GCCTAG
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Protein sequence | MSTSSSTSQQ LRWLCACYFF FFSILGTMVP YLGVFFENRG FNPQEIGFLL AILMATRIVA PNVWAKVADR TGMRAELIKM GAGAAALAYL SFFYHGGFVY MALSLALYTF FWNAILAQLE VITLETLGEN ASRYGQIRSF GSIGFICLVV GAGFAIGQWG TEVLPYIGLT LFTGMLLSAL PLPANRAVRP AGQERHRLKW TKPIVWFMIS AMLLQMSAGP FYGFFVLYLK QAGYSESSAG IFVALGAMAE IVMFMFAPRL LGRYGVNTLL IVSIGMTCLR WLLVAFGVDS VLWLGFSQLL HAFTFGLTHA ASIQFVHKHF DASHRSQGQA LYASLSFGVG GALGTWICGY IWGDGSGAVW SWVFAAVCAF AAMLAVFFIP KDKPGVAAHT A
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