| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2408 |
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| Symbol | trpA |
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| ID | 5080486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2789606 |
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| End bp | 2790442 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640499576 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001183928 |
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| Protein GI | 146293504 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATA CATTGACTAA CACAGGCCTT TACCAAGCGG CCCGTTACCA AGCCACCTTT
GCCAAACTCA AGGCCGAAGG CCGGGGCGCT TTTGTCCCCT TCGTCACCCT TGGCGATCCT
AGCCCTGAGT TATCGCTAAA AATTATCGAT ACCTTAGTGC AAAACGGCGC CGATGCCTTA
GAACTGGGCT TTCCGTTTTC CGATCCCTTG GCCGATGGCC CAGTGATCCA AGGCGCTAAC
CTGCGTTCTT TAGCCGCAGG CACGACTCCA ACGGCGTGTT TTGAATTACT GGCGCAAGTG
CGTGCAAAAT ATCCTGAACT GCCAATCGGT TTGCTGCTGT ATGCGAACTT GGTGTTTGCT
AACGGCATAG ATGTGTTTTA CGCCAAAGCG CAGCAAGCGG GTGTGGATTC AGTGCTTATC
GCCGATGTGC CAGTGGAAGA ATCCGCGCCC TTTAGCGAAG GCGCAAAAGC CCATGGTATT
GCGCCGATTT TTATCGCGCC GCCCAATGCC GACAGTGAAA CCCTTGAGCA AGTGAGTAAA
AGTGGTGAAG GTTACACCTA TCTCTTATCC CGCGCGGGAG TCACAGGCAC AGACACGAAA
GCTGGCGTGC CGGTAGAGGA AATTTTATCT AAATTAAAAG CCTTTAACGC CCCACCACCG
CTCCTCGGTT TTGGTATTGC CGAACCTTCA CAGGTAAGTG CCGCCATCAA AGCGGGCGCT
GCGGGGGCGA TTTCTGGCTC TGCCGTAGTA AAAATCATCG AAACCCACCA GCACGATGAA
GTTAAGCTAC TTGCAACGCT TGGGGAATTT ACTCGCGCAA TGAAGGCTGC GACCTAA
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| Protein sequence | MSDTLTNTGL YQAARYQATF AKLKAEGRGA FVPFVTLGDP SPELSLKIID TLVQNGADAL
ELGFPFSDPL ADGPVIQGAN LRSLAAGTTP TACFELLAQV RAKYPELPIG LLLYANLVFA
NGIDVFYAKA QQAGVDSVLI ADVPVEESAP FSEGAKAHGI APIFIAPPNA DSETLEQVSK
SGEGYTYLLS RAGVTGTDTK AGVPVEEILS KLKAFNAPPP LLGFGIAEPS QVSAAIKAGA
AGAISGSAVV KIIETHQHDE VKLLATLGEF TRAMKAAT
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