| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2390 |
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| Symbol | |
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| ID | 5080468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2768276 |
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| End bp | 2770771 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640499558 |
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| Product | hypothetical protein |
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| Protein accession | YP_001183910 |
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| Protein GI | 146293486 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.652609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTTAA GTCTGGCATG GCGTCTATTT AAACGTGAGT TACAGCAAGG GCAATTGTTA
TTGATTATCC TCGCTATCAC GCTCGCAGTA TTGTCTGTGA GCGGTTTAGC GCGGGTGAGC
GAGCGCTTGC AAGTGGCAAT TAATGGAGAG GCTTCAGCGT TTATTGCAGC CGATCGTATT
ATCGATTCAC CCGTGATAAT TGATCCCACT ATTTTAGCTA AAGCCGAAGA GCTTGGGCTT
AAGTATGTGA CTAACATGCA ATTTAATTCC ATGGTCTATT CGGGAGATAA ATTCCAGTTA
GTGACAGTGC GCGCTGTTGA GGTGGGTTAT CCACTCAAAG GTGAAATTGA GCTTACCACT
GGTAAAACAA AAGCGTTACC TAAAGCGGAT GAAATCTGGT TTGAGACGCG TTTAGGTGGG
CTTTTGGGAT ATCCCAAATC CATAGAGTTA GGTAACAGTG AGTTTGTGCT CAGCAATGAG
ATCAGCCGTT TGCCCGACGC AGGGTTCAAT CCTTTTGCTT CATCCCCTAT TGTGTTGATG
CGAATGGAAG ATGTGGCAAA AACGGGGGTT ATTCAACCGG GGAGCCGCGT CACGTATTTA
TATCAATTTG CAGGAGATGA AGCTGCCCTC ATCGCTTTTG AGCAAAGTGC CAAACCGCTG
CTGAATAGCA CCCAACGCTG GGTCGATGTG CAATCTGGCG ATTCGCCTAT AGCAGGCGCT
GTTAAGCGAG CAGAGCGTTT CTTGCTGTTA GCCAGTTTAA TGGGAATTGC ACTAGCTTGC
GCTGCGATAG GTATTGCTGC TCAGCGTTAT TGTCAGCGCC ATTACGATGT GGTGGCGATG
CTGAAAACTT TCGGTGCCTC AGCAAAACAA ATTCGTCTGC TGTTTGGCAT GCACTTATTA
CTTGTGACGT TATTGGGAAT AGGCTTAGGT CTTATCGGTG GTGGGTTACT GGATTTTGGG
ATCAGTTATC TATTGCCACC CGAAATTGCT GCTTATTCAC CGCCACTGAC TCGACCATTA
TTGCTCGGGA TAAGCACAGG GCTTATCAGC GCCTTTATGT TTTCAGCCTA CCCTTTGATG
CGGTTACTGG CTATTCCGCC ACTAAGGGTG CTGCAGCGTC AGTTAGAAGG TCTGCAACTT
GGCATGTGGT TGCATTTGCT ACTGAGTTTA GGGGCTATGG CGTTACTGGG ATATTTGTAT
TCCCAAAGTT GGGCTTTGAC ACTAACGGTC GTTGCGGCGG TCTTACTGCT TGGTGTGTTA
CTGGGTGTGC TGGGTTTTGT GATGATACGT GCAGGTCACA GCATAGGTAT GAAAACGACC
AATCCCTTAC AATTGGCGCT AGCGGGACTA AGGCGTCGTG CGCGGCAAAA TGCGGTGCAA
TTGGTCGGTT TTAGCGCGGC ACTCGTGTTG TTATTGACTA TTTTGGCGCT CAGGCAAGAT
TTACTTAACG AATGGCAAAA ACAGCTACCC GAAAATGCGC CGAACTACTT TTTAGTCAAT
ATTGCCCCCG ATGATGCTAA GCCTTTACAT GATTTTATGT CGGCAAATGG CATTACTGCG
ACGGATATTT ATCCGGTGAT CCGTGGACGT CTAACCCAAA TCAACGGGGA AACCTTGATT
TCTAATGAAC AGCGGGAGGC TGGTGAAAAG GGGCGCGTCG GGATTTCTCG TGAGCTCAAT
CTCACATGGC GTAATACCTT ACCCGCCAAT AACGAGTTAA TAGAAGGGCA GTTTAATCAA
GCTACCGATG AAGTGTCAGT CGAGTCAGGT GTGGCGGAGC GTTTAGGTAT TGGTCTTGGC
GATAAGTTGA CTTATATCAT CGATAATCAG GAGCTTACCG TAAAAGTTGC GAGTATTCGT
ACCGTGCACT GGGAAACTCT GCAACCAAAC TTCTTTATGA TCTTTACCCA AGAAGCACTT
GCACCTTTTG CGTATACCTC GATGGCAAGC TTTTTTTTAG ATGAAAAAGG TCTTGATGCT
CAGGCGACAA ATGCAGAGGG TATGCCTAAG GCATCGGTTA TCTTGGCGCT TATTCAGCAA
TTTCCGACGG TTTCCGTCAT AGATGTGGGC GCTATGGTAG GACAGTTGCG GCAGATCATA
GAGCAAGTGT CATTGTCGTT GACCTTAGTG CTAGTCTTAG TGTTATTAGC CAGTGGCTTA
GTATTGATTG CACAGACGGA AGCTGGCATG GCGACTCGGC AGCGTGAACT TGCGGTGCTA
CGTACTTTTG GTGCTTCGGG TTGGTTATTG CGCAGTGCAA CGGGCTTAGA GTTTGCTTTA
CTGGGCGGTA TTGCGGGTGT GTTAGCTGTG ATAGTAGCCG AATTTGCACT CTATCTACTA
AAAACTCAAG TGTTTGAACT TAATGTGTAT ATGCATTGGC CTTGGTGGGC AATTGCTCCT
GTATCCGGTG CATTGCTGGT GGCCTTGCTT GGGGTGTGGC GTTGCCGTCA ATTATTGAAT
CAATCCTGCT CTGAGTTATT AAAAGCAGGG AGTTAA
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| Protein sequence | MELSLAWRLF KRELQQGQLL LIILAITLAV LSVSGLARVS ERLQVAINGE ASAFIAADRI
IDSPVIIDPT ILAKAEELGL KYVTNMQFNS MVYSGDKFQL VTVRAVEVGY PLKGEIELTT
GKTKALPKAD EIWFETRLGG LLGYPKSIEL GNSEFVLSNE ISRLPDAGFN PFASSPIVLM
RMEDVAKTGV IQPGSRVTYL YQFAGDEAAL IAFEQSAKPL LNSTQRWVDV QSGDSPIAGA
VKRAERFLLL ASLMGIALAC AAIGIAAQRY CQRHYDVVAM LKTFGASAKQ IRLLFGMHLL
LVTLLGIGLG LIGGGLLDFG ISYLLPPEIA AYSPPLTRPL LLGISTGLIS AFMFSAYPLM
RLLAIPPLRV LQRQLEGLQL GMWLHLLLSL GAMALLGYLY SQSWALTLTV VAAVLLLGVL
LGVLGFVMIR AGHSIGMKTT NPLQLALAGL RRRARQNAVQ LVGFSAALVL LLTILALRQD
LLNEWQKQLP ENAPNYFLVN IAPDDAKPLH DFMSANGITA TDIYPVIRGR LTQINGETLI
SNEQREAGEK GRVGISRELN LTWRNTLPAN NELIEGQFNQ ATDEVSVESG VAERLGIGLG
DKLTYIIDNQ ELTVKVASIR TVHWETLQPN FFMIFTQEAL APFAYTSMAS FFLDEKGLDA
QATNAEGMPK ASVILALIQQ FPTVSVIDVG AMVGQLRQII EQVSLSLTLV LVLVLLASGL
VLIAQTEAGM ATRQRELAVL RTFGASGWLL RSATGLEFAL LGGIAGVLAV IVAEFALYLL
KTQVFELNVY MHWPWWAIAP VSGALLVALL GVWRCRQLLN QSCSELLKAG S
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