Gene Sputcn32_2338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2338 
Symbol 
ID5080361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp2688547 
End bp2689161 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content43% 
IMG OID640499501 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_001183858 
Protein GI146293434 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATAA TGATTATGAC TGAGGATTTT TTAGTTACGG TCGCCACCCT ATGTTACTAC 
CCAGTAAAAC TCGGATTAGT CGCAATGGTA CTGTACGTGG TGATACTGGC TGGTAGCCAA 
CTCCGAGAAT ATCTCAATCG TAGACAAGGA GAACGTCCTC TAATTGACAC TTTCCGTCAT 
AAATTAGTCC ATGTTATCCA AGATTCCCAA CAAAAATATT TAGATCTCGA ACTCGAAAAA 
TTAATACAAC AAACAGAACA TTTAGCCAAT ACGAATATTG AACGTCTTCG TTTTATCGTC 
CGTGCCGCAC CAGGGATTGG ATTGATGGGA ACACTTATTC CGATGGGGAT TGCGCTCGCC 
GCCCTTGCAC AGGGGAATAT GCCTGAAATG GCCGGAATGA TGGTTAACGC ATTTAATTCT 
GCCATTGTAG GATTAGGAAC AGGCGTCATT GCTTTTGCGC TAGCGTTAGT CAAAGAAAGC 
TGGATAAATA ACGACAAGAA TGAAATACGT TACCTTGCGG AACTTGCATC GATCGACCAC 
ACATCAATTT GTTCGCAAAC GACCCTCAAT TCAAATCCAC TCAATGAAGC GCATGCAATA 
GAGGGCTCGC TATGA
 
Protein sequence
MQIMIMTEDF LVTVATLCYY PVKLGLVAMV LYVVILAGSQ LREYLNRRQG ERPLIDTFRH 
KLVHVIQDSQ QKYLDLELEK LIQQTEHLAN TNIERLRFIV RAAPGIGLMG TLIPMGIALA 
ALAQGNMPEM AGMMVNAFNS AIVGLGTGVI AFALALVKES WINNDKNEIR YLAELASIDH 
TSICSQTTLN SNPLNEAHAI EGSL