| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2323 |
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| Symbol | |
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| ID | 5080296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2672603 |
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| End bp | 2673310 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640499486 |
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| Product | anti-ECFsigma factor, ChrR |
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| Protein accession | YP_001183843 |
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| Protein GI | 146293419 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3806] Anti-sigma factor |
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| TIGRFAM ID | [TIGR02451] anti-sigma factor, putative, ChrR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.586398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAGC ATCACCCAAA TCAACAACTA TTGCTTGCCC ATGTAAAGGG CGAGTTATCT
TTATCAATGG CTATTGCCGT TTCAGCCCAT TGTGCGCTGT GTGATACCTG TAAAACAGCT
GTTGCTCAAT ACACAAAAGA AGCCGCGTCC CTCGCCTTCA ATCAAGAGGA GATAGCCGAT
ACAACAGCAG ATAAAGCCGA CATCAGTGCT CACAGTATTG CATTCATGGA ATACGATGTT
CCTGAAGAGT TGCAAACCAT GTTAGCGCAA ATACTTTGTC AACCAGAGTC AACGACGACT
CCAAGTTATG AACCTCTTTT CGTCTCGGTA AAAAATCAGC AATACTCAGT ACCATCAGTA
TTTCGCCAAC ATCTTGATTA TCCTTGGCAA CAGTTAGGCA AAGTTAGCCG CATGCGTTTC
GATTTAGATG AGATGAATAC ACGCGCAAGC CTATTACATA TTGATGCATT AGGGGAAATT
CCACAGCATA CACACAAAGG CTATGAACTC ACCCTCCTAC TTGCCGGAGA ATTTAGTGAT
ATTAATGGCC ACTATGTTCC TGGTGACTTT ATTATGCTGG ACCAGCATAC TAAACATGCA
CCTAAAACAC TCGAGGGGTG CTTATGTTAC ACAGTGCTAG ATGCGCCTCT GCACTTCACT
AAAGGATTGA GCAAGTTATT AAACCCCATT GGCGAACTCA TTTATTGA
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| Protein sequence | MIKHHPNQQL LLAHVKGELS LSMAIAVSAH CALCDTCKTA VAQYTKEAAS LAFNQEEIAD
TTADKADISA HSIAFMEYDV PEELQTMLAQ ILCQPESTTT PSYEPLFVSV KNQQYSVPSV
FRQHLDYPWQ QLGKVSRMRF DLDEMNTRAS LLHIDALGEI PQHTHKGYEL TLLLAGEFSD
INGHYVPGDF IMLDQHTKHA PKTLEGCLCY TVLDAPLHFT KGLSKLLNPI GELIY
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