| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2322 |
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| Symbol | |
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| ID | 5080295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2671948 |
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| End bp | 2672610 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640499485 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001183842 |
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| Protein GI | 146293418 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.293844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATA TTCAATCACA AAGCCGCCAA AATCGGTATC ATAAGCACAT ATCGTCCTTC
ACTGAATCGG CTATGGATAT CGACACTAAA GCTCCCTGCG TAAGTGAACC ACAAATAGAA
TTGTTGTCCA CATTAATGCT CAAAGTGGCA AATCATAGAG ATAGAGCCGC TTTTGGATAT
TTATTTACTT ATTTTATGCC CAAAATCCGA GCGTTCGGTC TACAAAGACT CAATCAACAA
GGACTTGCCA TGGATCTGGT GCAAGAAACC ATGACGAGTG TCTGGACCAA AGCTCATCTC
TATAATGCTG ACAAAGGTTC AGTTGCCACT TGGGTATTTA CCATCATGCG TAATCAGTGC
TTCGATATGT TAAGACGAGT CCAACATAAT AAGGAAGATG CCTACGGTGA TGATATTTGG
CCTTTATGCG ATACGGCCAC GAGTCAAGAA ACTCAAATTG ATCATAAATT AACAGCCAAC
CTACTCAAAC ATTTAGATAA TCTTCCCCTT GCACAACGTC AGGTTGTACA AGGTATTTAT
ATGCAAGAAC TCACTCAGCA AGAATTGGCT GACGCCCTAG AAGTCCCGAT AGGAACAATA
AAATCTCGCC TAAGATTGGG GCTAGAAAAG CTGAAAAGCT TTTTGGAGAC ACCAAATGAT
TAA
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| Protein sequence | MENIQSQSRQ NRYHKHISSF TESAMDIDTK APCVSEPQIE LLSTLMLKVA NHRDRAAFGY
LFTYFMPKIR AFGLQRLNQQ GLAMDLVQET MTSVWTKAHL YNADKGSVAT WVFTIMRNQC
FDMLRRVQHN KEDAYGDDIW PLCDTATSQE TQIDHKLTAN LLKHLDNLPL AQRQVVQGIY
MQELTQQELA DALEVPIGTI KSRLRLGLEK LKSFLETPND
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