Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2244 |
Symbol | |
ID | 5080216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2584656 |
End bp | 2585468 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640499406 |
Product | hypothetical protein |
Protein accession | YP_001183764 |
Protein GI | 146293340 |
COG category | [S] Function unknown |
COG ID | [COG1806] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.277216 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCACCAA AAGTATTCTA CATCTCCGAC GGGACAGCGA TCACAGCTGA AGTTTTTGGA CATGCAGTTC TCTCGCAATT TCCATTAGAA TTTGAGTCAC TTACAATTCC ATTCGTAGAA ACTTTGGCAA AGGCAGAACA AGTTAAGCGA CAAATAAATG ATTGTTTTAT TACAACAGGT GAACGGCCAT TAGTCTTCCA TTCCATCGTA AAAGCTGAAA TTCGCGACAT TATTTATTCG AGCGAGGGCG TTGATTATGA TTTTTTAAAT ACCTTTGTGG CCCCACTCGA ACAACATTTA GGTGTTTCAG CTTCACCTGT TGTACACAGA ACCCATGGCA AAGCAAATCA CGGCTATGAA GCACGTATCG ATGCGATCAA TTTCGCCATG GATAATGACG ATGGCCAAAC CATGAAACAT ATGGATCAAG CGGATTTAAT TTTGCTGGGG GTTTCTCGCT GCGGTAAAAC CCCGTCTAGC TTATATTTAT CGATGCAATT TGGTATTAAA GCGGCAAACT ACCCTTTCAC TGAAGATGAT ATGGATAATC TCAAATTACC TGAAGCCCTT AAACGTAATA AGAAAAAACT CTTTGGTTTA ACCATTGATC CTGTACGTTT GCATGAAATT CGCCAGAGTC GAATGGAAAA TAGCCGTTAT TCATCACTCA AGCAGTGCCG CTTAGAAGTT AAAGAAGTGG AAATGATGTT TAAACGCGAA CGTATTCCTT ATATAGACAC GACTAATCAT TCTGTGGAAG AAATAGCCAC AAAAATATTA GATGTCACAG GCCTTGAACG GCATATGTTC TAG
|
Protein sequence | MAPKVFYISD GTAITAEVFG HAVLSQFPLE FESLTIPFVE TLAKAEQVKR QINDCFITTG ERPLVFHSIV KAEIRDIIYS SEGVDYDFLN TFVAPLEQHL GVSASPVVHR THGKANHGYE ARIDAINFAM DNDDGQTMKH MDQADLILLG VSRCGKTPSS LYLSMQFGIK AANYPFTEDD MDNLKLPEAL KRNKKKLFGL TIDPVRLHEI RQSRMENSRY SSLKQCRLEV KEVEMMFKRE RIPYIDTTNH SVEEIATKIL DVTGLERHMF
|
| |