| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2231 |
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| Symbol | |
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| ID | 5080203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2569233 |
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| End bp | 2570045 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499393 |
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| Product | pseudouridylate synthase |
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| Protein accession | YP_001183751 |
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| Protein GI | 146293327 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00399974 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTCTCAAC CTCCTGTTAG CAAAAGTATG AACAAAAACA AGTTTCCACC TAAAGGTGCC
AATTCCAGTA CTAGTTCCCC AGCCAAGAGC ACGATTAAAC CCGCGAAGCA CGCCAGCAGA
GGCCCAGTCA ACCGCGCTAC CGCCGTAGAT AGCAAAGTGG CGCCAGCACG TAATGCCAAT
GGCAGTTTAA AGAAAGAACC CTTTAAAAAT CCTAATCGAC GCGCAATTGC GGCAGCAAAA
CCGGTGCAGA GCCAAACGCT CGCACCGATT ATTGTACTGT TTAATAAGCC TTTTGATGTA
CTTTGCCAGT TTACCGATGA ACAAGGTCGC AAAACCCTAA AAGACTATAT CCCGATTGCT
GATGTGTATG CCGCTGGCCG CTTAGACAGA GACAGTGAGG GCTTATTGCT GCTAACTAAT
GACGGTCAAT TACAGGCAAG GCTGACAGAG CCGAAAAAGA AAACCTTTAA AACCTATTGG
GTGCAAGTAG AAGGCGTTCC GACAGAAGAT GCCCTGACAA AACTGCGCCA AGGTGTTGAA
TTAAATGATG GTATAACGCT ACCAGCTAAA GTCAAAATTA TGGATTCACC CGATATTTGG
CCACGTAATC CACCAGTAAG AGAGCGCAAA AATATCCCAA CAACTTGGCT AGAAATCCAA
ATTCATGAAG GCCGTAACCG CCAAGTCAGA CGCATGACAG CGCATATCGG TTTTCCGACC
TTAAGATTAA TCCGTTATAA AATAGGCCAA TGGAGTCTAG ATAATTTGCC ATCGGGTGAG
CACAAATGCA TTCGTCTCGG TGATGAAGTC TAA
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| Protein sequence | MSQPPVSKSM NKNKFPPKGA NSSTSSPAKS TIKPAKHASR GPVNRATAVD SKVAPARNAN
GSLKKEPFKN PNRRAIAAAK PVQSQTLAPI IVLFNKPFDV LCQFTDEQGR KTLKDYIPIA
DVYAAGRLDR DSEGLLLLTN DGQLQARLTE PKKKTFKTYW VQVEGVPTED ALTKLRQGVE
LNDGITLPAK VKIMDSPDIW PRNPPVRERK NIPTTWLEIQ IHEGRNRQVR RMTAHIGFPT
LRLIRYKIGQ WSLDNLPSGE HKCIRLGDEV
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