Gene Sputcn32_2194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2194 
Symbol 
ID5080316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp2522380 
End bp2523399 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content41% 
IMG OID640499356 
Productdihydroorotate dehydrogenase 2 
Protein accessionYP_001183714 
Protein GI146293290 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase 
TIGRFAM ID[TIGR01036] dihydroorotate dehydrogenase, subfamily 2 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTATA AAATCGCACA GAAAGTCATG TTTCAGATGG ATCCTGAGCG AGCGCATAAT 
CTGGCTATTG GCAGCTTAAA AATGACAGGC AACAGTCCGT TAAACTGCTT TTATCGCCAA 
ACGATTGCGC CAGCTCCAGT CACATTTATG GGGCTGACTT TTCCAAATCC GGTAGGTCTC 
GCTGCGGGAA TGGATAAAGA CGGCGAATCA ATTGATGCCT TTCATGCGAT GGGATTTGGG 
CACATTGAGG TGGGCACCGT TACCCCAAGA CCACAACCAG GTAATGATTT ACCCCGTTTA 
TTTAGATTAA AACCTGCCAA AGGCATCATT AATCGAATGG GGTTTAATAA CAAAGGGGTT 
GATAATTTAG TTAGAAATTT GATCGCGAAA AAGTCCGATA TCATGGTGGG TGTTAATATT 
GGTAAAAATA AAGACACACC AGTGGAGCAG GGCAAAGATG ATTATTTGAT CTGCATGGAT 
AAAGTTTATC CCTATGCCGC TTATATTGCG GTGAATATTT CATCTCCCAA TACCCCCGGA 
TTACGATCGC TACAATATGG CGATCTATTA GATGAATTAT TAAGCGCCAT TAAAACAAAG 
CAACTTGAAC TGGCTGAGAA GCATAAAAAA TACGTGCCTA TCGCACTTAA AATTGCACCA 
GATTTAACCA TTGAAGAAAT TGAAAATATC GCCGACGCGC TGATTAAAAA TAAATTTGAT 
GGTGCTATTG CAACGAATAC CACGTTAACG CGCGATGGCG TTAGTGGCCT TGCTAATGCT 
AATGAAAGCG GTGGTTTAAG CGGCAAACCT TTAACAGAGC TGTCAACAAA AGTGATAAGG 
CAATTGGCAG CATGTTTGAA AGGACAGATC CCAATCATAG GCGTAGGTGG GATTAATAGT 
GCTGAAGATG CCCTAGCAAA ATTTGATGCG GGCGCCACTA TGGTACAGAT TTATTCTGGT 
TTTATTTACC AAGGTCCGAA GTTAATTAAA GAGATAGTAG AAGCTTATCG CTTAAAATAA
 
Protein sequence
MFYKIAQKVM FQMDPERAHN LAIGSLKMTG NSPLNCFYRQ TIAPAPVTFM GLTFPNPVGL 
AAGMDKDGES IDAFHAMGFG HIEVGTVTPR PQPGNDLPRL FRLKPAKGII NRMGFNNKGV 
DNLVRNLIAK KSDIMVGVNI GKNKDTPVEQ GKDDYLICMD KVYPYAAYIA VNISSPNTPG 
LRSLQYGDLL DELLSAIKTK QLELAEKHKK YVPIALKIAP DLTIEEIENI ADALIKNKFD 
GAIATNTTLT RDGVSGLANA NESGGLSGKP LTELSTKVIR QLAACLKGQI PIIGVGGINS 
AEDALAKFDA GATMVQIYSG FIYQGPKLIK EIVEAYRLK