| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2108 |
|---|
| Symbol | |
|---|
| ID | 5078313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 2417927 |
|---|
| End bp | 2418991 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640499270 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001183628 |
|---|
| Protein GI | 146293204 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTT GGCAGCAATG GCTTGAAAGA CGCCTCCCTC CCAATTCCGA AATCACCCTC
AGCCATCGCA GTATTTTTAT TCTGCCCAGT GGGTTTGGGC TTATCTGGCT CAGTCTTGTT
TTACTGTTAT TTATATTTGG AACCAACTAC CAAAACAATT TGGTGATCGG GTTAAGTATT
TTACTCTTAA GTCTTTTTAA CACCTGTATT CTCTACAGCT ATAACAACCT TGCTGGGCTA
CATTTACGGG CAGATATACC GCCTGAAGTC TATGCGGGGC AAACTCTCAC CTTCCCCATT
CAGCTTAAAT CCCACCATAA CCGTTATCAT ATCCACCTAA AATACCCAAA CAATCACAGT
TACACGCTTA TGCTAGTCGG CATAGATGAA GTCCAAGCCC TCGTTCCCTT TGAACATGGA
AAACGCGGTA TTGTGAGACC GGGACGACTG ACCATTGAAT CTTGCTATCC ACTGGGGCTT
TGTCGTACCT GGTCCTATGT TGATTTGGCT ATCACTCATA TCGTCTATCC AAAACCAATA
GAAACCCCAC TCCAACTTTT AGCAAGGCTT GAACACACTG AGCCACCCAG CACATTCACA
GGCCAGCATG TAGCGGGTAT TGATGAGTTT AAAGGGCTCA AACCCCATGT ACTGGGCGAA
TCCCTTAAGC AAGTAGCCTG GAAACAATGG GCGCAGGGAC GCGGCATGCT AAGTAAAGAA
TTTGAGCAGC CCCAAGGTAA GCCTCTATGG TTAATACTAA GGCCCGAACC TAAATCGCTT
GAACGCCAAT TAAGCCAATT AAGTTGGCAA GTGAATAAAC TGAGTCAAGG TGAGCAGCAT
TTTGGCCTCT GGTTACACAT CCCTTCTGGC AAGGATATTA TTCTGCCGCC CGCTGTCGGC
AATCGTCATC GCATGGCTAG CCTGAAAGCT CTGGCACTCT ATCGGCTCAA TCCACACACG
CCACAAGCGG GTGATCTCTC CCATAGTGCT AGCGCTGATT CACTTTTTGA CGACAAGGAA
TACATTGAGA AACTGCGCAC ATTCACGCCG AGCCGCTCAA AATGA
|
|---|
| Protein sequence | MRIWQQWLER RLPPNSEITL SHRSIFILPS GFGLIWLSLV LLLFIFGTNY QNNLVIGLSI
LLLSLFNTCI LYSYNNLAGL HLRADIPPEV YAGQTLTFPI QLKSHHNRYH IHLKYPNNHS
YTLMLVGIDE VQALVPFEHG KRGIVRPGRL TIESCYPLGL CRTWSYVDLA ITHIVYPKPI
ETPLQLLARL EHTEPPSTFT GQHVAGIDEF KGLKPHVLGE SLKQVAWKQW AQGRGMLSKE
FEQPQGKPLW LILRPEPKSL ERQLSQLSWQ VNKLSQGEQH FGLWLHIPSG KDIILPPAVG
NRHRMASLKA LALYRLNPHT PQAGDLSHSA SADSLFDDKE YIEKLRTFTP SRSK
|
|---|
| |