| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2105 |
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| Symbol | |
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| ID | 5078310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2413952 |
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| End bp | 2415877 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499267 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001183625 |
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| Protein GI | 146293201 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.828929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCAAGC CATTAATGAA TATGGTTTTA TCGAGCGCAA TTATCATAGC TGGTGCATTC
AATGCCTCTG CTGCTTTCGC CTTGACCCCA GTTCAAAAAA CATTTTTAGA AGCAGAAAAA
GCGCTAAAAA AACAAGATTA TGCAAACTAT AAACCCCTTC GCGCAAAATT GGGTGACTAT
CCGCTGGCGA TTTATTTAGA CCATGATATC GATATAGGTA ACCTCAATGC GCTACCGGGC
ACTCAAGCCA AGGCGCTTAT TGATAAATAC CAAACCACAC CTATGTATAA CCGCTTGCGC
GCGAAGTATT TAACCAATGC AGGTAGTCAA AAACGCTGGA ATGACTTTCT TGTGATAGCG
AAAGATCCAC CCTCGGATAT TCGCCTGCAG TGTCTTTTTT ATGAAGCCAA ACTTGCCAAG
GGTGAAACGC AAACCGCCTA TGCCGCCGCA CAATCACTGT GGGTTTATGG CGGTTCTCGT
CCTAAAGAAT GTGATCCCCT CTTTAACGCG TGGATAAAAA CGGGCAAGCG TACTCAAGAT
CTGATTTGGG CGCGAATGCT GCTAAGTTTT GATGAGGGCG AAACCAGTTT ATTGAGTTAT
TTATCCCAAA AAATCACCAC CCATAATAAC GAAGCTAAGC GTTTAGTGGC GGTGTTTAAG
GACCCGAATA GCCTACGACA TACCGAAAAA TTCAACGATA AAAATCCCAT TGTGGGCGAT
ATTGTCGCCC TTGGGTTAAA GCGACTGGCC CGCAAGGATC TCGACCAAGC CATCCATTTA
TATACCCGAT ATCAAAAGTC TAAGCGCTTT ACTCCCGCTC AAGCACAACA ACTGCAAAAA
TTCTTAGTCC GTCGAGTATT AATTGAGCAA GATGACAATC ATAAAGATTT CGTGGACACA
CTCTTACCCG AAATGAAAAG CGATGATTTA GTTGAACGTC GTTTGAGGTG GGCCATTCGT
AAACAAGATA CAACCCATAT TGCCCGTTAC CTAAACTTAC TCGAACCAGA AACCCTCGCC
AAAGAGCGTT GGCAATACTG GTTATACCGC ACCAATGCAA AAAATGCCCC TGATAGCGCA
ACAAAAGCAC TCGGGGCCAT CAGTAACGAG CGTAATTTCT ATGGTTTTGC CGCCTCACAA
CTGTTAAATA AACCGGTATC GCTCAACCAA AGCCCTGAGC CTGTTGTGGA TGCAAGCAGT
CCAAAACTAG AGGATGACTT AGGTTTTGTA CGCGTAAAAG AACTGATGGC GCTGGATCGA
TATTTCGATG CCCGTTATGA ATGGGTTACG TTACTCAAGC GCAGCGACAA CCCAATGCGG
GCCCGCTACG GCCGTTATGC CCATGCTCAA GGTTGGTATG ATTTTGGTGT CGAGGCGAGT
ATCCAAGGCA AATTATGGGA CGATATTCCC CTACGCTTTC CCATGGCACA TCAACCCGGA
TTTGAACATG CCAGCAAAAA GCATCGGGTT AATATCGATG AAATCCGTGC AATTAGCCGC
CGCGAAAGTG CTTTTTATCG CTATGCGACC TCTGGTGTTG GCGCCCGAGG CTTAATGCAA
ATTATGCCTG CAACCGCCAA AGCCACCGCT AAAAAACATG GCGCAAAATA TAGCGATCCT
AAGGATCTTT ACAGTGCAGA GCTTAATCTT AATTTGGGTA GCGCCTATTA CGCCCAGCTT
TTAAAAGAGT TTAATCAAAA CCGTGTACTT GCCACCGCAG CCTATAATGC TGGCCCCTCA
AGGGTACGCC GCTGGTTAGC TGAGTCCAAT GGCCGATTGG ATACCATGGG ATTTATTGAG
TCCATTCCCT TCACTGAAAC CCGTGAATAT GTCCAAGCAG TGCTGAGTTA CCGCTTGATT
TACGAAGCGC AAAAGAAAAA TCCACAACCC TTGTTCAGTG ATGCTGAGCT AAAATTTAGC
TATTAA
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| Protein sequence | MCKPLMNMVL SSAIIIAGAF NASAAFALTP VQKTFLEAEK ALKKQDYANY KPLRAKLGDY
PLAIYLDHDI DIGNLNALPG TQAKALIDKY QTTPMYNRLR AKYLTNAGSQ KRWNDFLVIA
KDPPSDIRLQ CLFYEAKLAK GETQTAYAAA QSLWVYGGSR PKECDPLFNA WIKTGKRTQD
LIWARMLLSF DEGETSLLSY LSQKITTHNN EAKRLVAVFK DPNSLRHTEK FNDKNPIVGD
IVALGLKRLA RKDLDQAIHL YTRYQKSKRF TPAQAQQLQK FLVRRVLIEQ DDNHKDFVDT
LLPEMKSDDL VERRLRWAIR KQDTTHIARY LNLLEPETLA KERWQYWLYR TNAKNAPDSA
TKALGAISNE RNFYGFAASQ LLNKPVSLNQ SPEPVVDASS PKLEDDLGFV RVKELMALDR
YFDARYEWVT LLKRSDNPMR ARYGRYAHAQ GWYDFGVEAS IQGKLWDDIP LRFPMAHQPG
FEHASKKHRV NIDEIRAISR RESAFYRYAT SGVGARGLMQ IMPATAKATA KKHGAKYSDP
KDLYSAELNL NLGSAYYAQL LKEFNQNRVL ATAAYNAGPS RVRRWLAESN GRLDTMGFIE
SIPFTETREY VQAVLSYRLI YEAQKKNPQP LFSDAELKFS Y
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