Gene Sputcn32_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2020 
Symbol 
ID5078223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp2303714 
End bp2304343 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content41% 
IMG OID640499180 
Productriboflavin synthase subunit alpha 
Protein accessionYP_001183540 
Protein GI146293116 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.025182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACAG GTATAGTTCA AGCCACCTGC GAGGTGGTTG CAATACATAA GAAAGATGGC 
CTAAATACCC TTGAGGTAGC GTTTAAACCT GATTTGCATG AGGGACTTGC GATTGGTGCA 
AGTGTGGCAA ATAACGGGGT ATGTCTTACA GTGACTCAGG TGGTTGATGA TAGGGTATTT 
TTCGACGTAG TGGAAGAGAC ATTACGACTG ACGAATCTCG CTAATTTGTC TGTAGGTCAA 
TACGTTAATG TTGAACGCTC GTTAACTTTT GGTAGTGAAA TTGGAGGACA TATTCTTTCT 
GGCCATATCC ATACAAAGGC TAAAGTTACC AATATTAGCC ACACAGAACA GCATTACGAT 
TTGACATTGA GTGTTGAACC TAAATGGATG GACTATATAT TTTATAAAGG ATTTGTAGGT 
ATAAATGGTT GCAGCCTAAC GGTGGGTGAG GTGACAGAGA CAAGTTTTAT GCTGCACTTA 
ATTCCAGAAA CACTCAAGCT CACCAATTTA GGTCAGTGCA AGGTAGGTGA TGAATTGAAT 
ATTGAAATCG ACAGTCAAAC GCAAGTCATC GTCGACATTG TCGAGCGTGT ACTGGCCAAA 
CGCTTGAGCG AGTATTCATT AAATAATTAA
 
Protein sequence
MFTGIVQATC EVVAIHKKDG LNTLEVAFKP DLHEGLAIGA SVANNGVCLT VTQVVDDRVF 
FDVVEETLRL TNLANLSVGQ YVNVERSLTF GSEIGGHILS GHIHTKAKVT NISHTEQHYD 
LTLSVEPKWM DYIFYKGFVG INGCSLTVGE VTETSFMLHL IPETLKLTNL GQCKVGDELN 
IEIDSQTQVI VDIVERVLAK RLSEYSLNN