14 homologs were found in PanDaTox collection
for query gene Sputcn32_1997 on replicon NC_009438
Organism: Shewanella putrefaciens CN-32



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009438  Sputcn32_1997  hypothetical protein  100 
 
 
76 aa  153  9e-37  Shewanella putrefaciens CN-32  Bacteria  normal  0.0204928  n/a   
 
 
-
 
NC_008321  Shewmr4_2003  hypothetical protein  70 
 
 
72 aa  100  5e-21  Shewanella sp. MR-4  Bacteria  normal  0.040886  hitchhiker  0.000000126675 
 
 
-
 
NC_008322  Shewmr7_1972  hypothetical protein  70 
 
 
72 aa  100  5e-21  Shewanella sp. MR-7  Bacteria  normal  0.187573  hitchhiker  0.00803379 
 
 
-
 
NC_009665  Shew185_2173  hypothetical protein  70.31 
 
 
64 aa  95.5  2e-19  Shewanella baltica OS185  Bacteria  normal  0.164991  n/a   
 
 
-
 
NC_009997  Sbal195_2223  hypothetical protein  69.84 
 
 
72 aa  92  2e-18  Shewanella baltica OS195  Bacteria  normal  0.0718159  normal  0.256539 
 
 
-
 
NC_011663  Sbal223_2211  hypothetical protein  69.84 
 
 
72 aa  92  2e-18  Shewanella baltica OS223  Bacteria  normal  0.274978  normal  0.549823 
 
 
-
 
NC_009035  Sbal_4484  hypothetical protein  69.84 
 
 
72 aa  91.3  4e-18  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2198  hypothetical protein  69.84 
 
 
72 aa  91.3  4e-18  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2428  hypothetical protein  61.29 
 
 
95 aa  80.9  0.000000000000006  Shewanella woodyi ATCC 51908  Bacteria  normal  0.219089  hitchhiker  0.0000666131 
 
 
-
 
NC_009901  Spea_2212  hypothetical protein  61.67 
 
 
85 aa  77.8  0.00000000000005  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.000284411  n/a   
 
 
-
 
NC_009831  Ssed_2208  hypothetical protein  53.33 
 
 
95 aa  71.2  0.000000000004  Shewanella sediminis HAW-EB3  Bacteria  normal  0.962024  normal 
 
 
-
 
NC_007954  Sden_1854  hypothetical protein  55.56 
 
 
113 aa  66.2  0.0000000001  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2008  hypothetical protein  57.38 
 
 
95 aa  65.5  0.0000000002  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.0000218083  n/a   
 
 
-
 
NC_008700  Sama_1788  hypothetical protein  52.83 
 
 
109 aa  63.5  0.0000000008  Shewanella amazonensis SB2B  Bacteria  normal  0.216749  normal  0.175833 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>