| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1853 |
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| Symbol | |
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| ID | 5080161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2120613 |
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| End bp | 2121179 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640499008 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001183375 |
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| Protein GI | 146292951 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.124866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTGAGTC TTCTTTGTGC GGGTTTGTAT GTCGCAGGCT TAGCAAGCCC TGCTGTCGAT
AACCTACTCG CCTATCGCCG CAGTGCCATT AGTGAGGGGG AATGGTGGCG ATTAATCAGT
GGAAATTTAC TGCACACGAA TCAATGGCAT CTATTGATGA ACCTTGCAGG GCTCTGGGTA
GTGCTATTTT TGCACCATTT TCATTATCAT CTCAAAGGCT TAAGTGCACT ATTTTTCGTG
TTATGTTTAC TCGAAGGTAT AGGCTTGTAT TTAGGCTATC CGCAATTGGT TGGTTATGTC
GGTTTAAGCG GTATGTTGCA TGGTTTATTC GCCTACGGCG CGGTGCAGGA TATTGTTCGT
AAGCTGCGCT CAGGCTATCT GCTGCTCGTT GGCGTTATCA TCAAGGTCGG TTACGAACAG
CTTTATGGTG CCAGCAGTGA TGTCACCGCC ATGATCGGTG CGCGGGTAGC AACCGAGGCG
CATTTGGTCG GCTTAATCTG CGGGCTGATT TGCGCTTTAG CGGTGTTTAT TAAGCTTAAA
TTAGAACACT CGAAAGGCAC CATTTAG
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| Protein sequence | MVSLLCAGLY VAGLASPAVD NLLAYRRSAI SEGEWWRLIS GNLLHTNQWH LLMNLAGLWV
VLFLHHFHYH LKGLSALFFV LCLLEGIGLY LGYPQLVGYV GLSGMLHGLF AYGAVQDIVR
KLRSGYLLLV GVIIKVGYEQ LYGASSDVTA MIGARVATEA HLVGLICGLI CALAVFIKLK
LEHSKGTI
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