Gene Sputcn32_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1717 
Symbol 
ID5079275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1957140 
End bp1958006 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content52% 
IMG OID640498866 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001183241 
Protein GI146292817 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACA CACAACACCA GAACACTAGC ACTCAATCCT TAGGCAATTT GCAGCACGCC 
TTAGACCATT TGCAACATGT AAGTTACGCG CTGAATAACG GCGTAGGCGA GTTAATCCTT
AACCGAGCCG AAGTGCACAA CGCCTTCGAT GAGGTGATGA TTAGCGAAAT GATCGTCGTC
CTCGGTTATT TTGCCGAGCA CAAAGACTGC AAACTGTTGG TATTAAAAGC CAATGGCAAA
AACTTCAGCG CTGGCGCCGA CTTAAATTGG ATGCGCAAAC AAGCAAAGAT GGATTTCGAT
CAAAACCTCA ATGACGCCAA AGCACTGGCT AAGCTGATGC AGGATTTAGA TACCTTTCCA
AAACCCACTA TCGCCTTAAT CCAAGGTGCG GCCTTTGGCG GCGCGCTTGG GTTAATCTGC
GCCAGTGATA TTGCCATCGC CACCGAGCGT GCCAGTTTCT GCTTAAGCGA AGTCAAACTA
GGGCTGATCC CTGCGGTGAT TAGCCCCTAC GTTGCCCGCG CTATGGGCAA TCGCGCCTCA
CGCCGCTATA TGCTGACCGC AGAGCGTTTT GATGCGCAAA CAGCGCTCAA ACTCAATGTT
ATCCATGAGA TAAACGACGA TTTAGCGGCC GCAGCCCAAC CCATTATCAC CGCGCTGCTG
GCCAACAGTC CGCAGGGAAT GGCATGGGTA AAGACCCTAC TCGCCCGCCT CGAAGACGGC
GTGATAGACC AAGATACGAT TGATTACACC AGCGAGCGCA TCGCCCGCAT TCGGGTATCT
GATGAAGGCC AAGAGGGCTT AAACGCCTTT TTTGAGAAAC GTCAGCCGAA CTGGCACACG
CCAACCGATA CCCAAGGAGC ACTTTAA
 
Protein sequence
MTDTQHQNTS TQSLGNLQHA LDHLQHVSYA LNNGVGELIL NRAEVHNAFD EVMISEMIVV 
LGYFAEHKDC KLLVLKANGK NFSAGADLNW MRKQAKMDFD QNLNDAKALA KLMQDLDTFP
KPTIALIQGA AFGGALGLIC ASDIAIATER ASFCLSEVKL GLIPAVISPY VARAMGNRAS
RRYMLTAERF DAQTALKLNV IHEINDDLAA AAQPIITALL ANSPQGMAWV KTLLARLEDG
VIDQDTIDYT SERIARIRVS DEGQEGLNAF FEKRQPNWHT PTDTQGAL