| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1697 |
|---|
| Symbol | |
|---|
| ID | 5079355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 1936193 |
|---|
| End bp | 1937275 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640498846 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001183221 |
|---|
| Protein GI | 146292797 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.588209 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTACTG TTTTCACCCG CTGGTATCAG GAACGCTTTA GTGATCCTCA GGCTGTGACC
CTCATGGCGA TATTAATCGG TCTTGCATTG CTAATTTACT TTGCAGGGGG ATTGCTGGCG
CCTTTGCTCG TGGCATTGGT ACTCGCATTT TTGCTGGAGT GGCCTGTTGC ACAAATGCTC
AAATTAGGCA TCAACCGTAC TATGGGCGCG TCACTGGTGT TGGTGCTCTT TTTAGGGGTA
GTTATGCTCT TAACCTTCGG ACTGATTCCC AGTGTCTGGC GTCAAGGTGT GAGCTTAATG
GCTGATTTGC CAAACATGAT AGACAAAGGC TTACAAACCT TGCAGGCCTT GATAAACCAA
TATCCACAGT TTATCAATCC TGAACAACTC AATGTAATGG TTGCCGAGTT GAAGAAGATG
CTCGATACCC AGCATGTGCT TGATATTGCA AAGCAGATTA TTGGTTATTC CGCCTCTTTA
TTGGTCCTTA TGGTGTATGC GATTTTAGTG CCCTTATTAG TGTTTTTCTT TTTAAAGGAT
AAAGACCAAC TTATTCGTGG CAGTAAGCGG TTTTTCCCTG CAAATCGTCA ATTAGCGCGT
CAAGTATGGT TTGAGATGAA TCAACAGATC TTTAACTACA TTCGCGGCAA AGTGATTGAA
ATTGTGATTG TAGGTGTTGC GAGTTACATA TTTTTTGCAT TTATGGGGTT GCGTTACTCA
GCACTGCTTG GCGTATTAAC GGGTTTATCT GTACTCATTC CGTATGTTGG TGCAACGCTG
GTGACATTAC CTATTACCTT AGTAGCATTT TTCCAATGGG GATTTACCTC CGAATTTGGT
TATTTAATGC TAGGCTACGG TATTATCCAA GCCCTTGATG GTAATCTGCT TGTCCCCATT
TTATTCTCGG ATGCGGTGGA TTTACACCCA GTGATCATTA TTGCAGCAGT GTTAGTTTTT
GGTGGATTAT GGGGCGTTTG GGGCGTCTTT TTTGCGATTC CGTTAGCCTC ACTCGTTAAA
GCGGTGATCA ATGCTTGGCC TAAAACGGAA ATTCAAGAGC CCGTACCTGC GCCCAGCAAT
TAA
|
|---|
| Protein sequence | MLTVFTRWYQ ERFSDPQAVT LMAILIGLAL LIYFAGGLLA PLLVALVLAF LLEWPVAQML
KLGINRTMGA SLVLVLFLGV VMLLTFGLIP SVWRQGVSLM ADLPNMIDKG LQTLQALINQ
YPQFINPEQL NVMVAELKKM LDTQHVLDIA KQIIGYSASL LVLMVYAILV PLLVFFFLKD
KDQLIRGSKR FFPANRQLAR QVWFEMNQQI FNYIRGKVIE IVIVGVASYI FFAFMGLRYS
ALLGVLTGLS VLIPYVGATL VTLPITLVAF FQWGFTSEFG YLMLGYGIIQ ALDGNLLVPI
LFSDAVDLHP VIIIAAVLVF GGLWGVWGVF FAIPLASLVK AVINAWPKTE IQEPVPAPSN
|
|---|
| |