Gene Sputcn32_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1650 
Symbol 
ID5079398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1882182 
End bp1882649 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content46% 
IMG OID640498799 
Producthypothetical protein 
Protein accessionYP_001183174 
Protein GI146292750 
COG category[S] Function unknown 
COG ID[COG1671] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTATCC AAGTATTGAG TGATTATAAA ATTTGGGTTG ATGCCGACGC TTGCCCTAAT 
CCTATCAAAG AAATACTCTT TCGGGCGGCA GAGCGAAAAG CCTTACCCCT TGTGCTAGTC
GCAAATCAGA TGATCCGTGT ACCACCATCG CCTTATATCA GCCAAATTCG AGTGGGGGCG
GGGTTTGACG TAGCGGATCA ATATATTGTC GATCATGTTA AGCCTACGCA TTTAGTGATC
ACGGCGGATA TTCCTTTGGC CGCCTTAGTG ATTGAAAAGG GCGCTTTGGC ACTCAATCCC
CGTGGTGAGT TGTACACCAT CGATAACATA AAACAAAAAT TAACGATGCG GGACTTCATG
GAAGACTTGA GAGGTTCTGG CGTGCACACT GGTGGTCCCG ATTCGTTCTC ACAAGCGGAT
AAACAGGCTT TTGCCAACAG TTTAGATAAA TGGTTAGTGC GAGTTTGA
 
Protein sequence
MSIQVLSDYK IWVDADACPN PIKEILFRAA ERKALPLVLV ANQMIRVPPS PYISQIRVGA 
GFDVADQYIV DHVKPTHLVI TADIPLAALV IEKGALALNP RGELYTIDNI KQKLTMRDFM
EDLRGSGVHT GGPDSFSQAD KQAFANSLDK WLVRV