Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1645 |
Symbol | |
ID | 5079393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1876212 |
End bp | 1877054 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640498794 |
Product | hypothetical protein |
Protein accession | YP_001183169 |
Protein GI | 146292745 |
COG category | [S] Function unknown |
COG ID | [COG2996] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.942277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTACAGA TAGGTAAAAC CTGCAAACTT GAGGTTGTAA AACAAGTCAG CTTTGGCGTG TATTTAAACG CCCACGAATT AGGGCAAGTA CTGCTGCCAA ACAAAGTCAC CCCGAAAGAC TGCCAAGTCG GTGATCTGCT TGACGTGTTT CTGTATCTCG ATTCTGAAGA TATCGTGATT GCCACCACGG GCCGTCCATT GGCACAAGTG GGGGAATTTG CTTATTTAAA AGCCGTCGCA ACGGGTCCCT ATGGTGCCTT TTTAGACTGG GGCTTAGATA AAGACCTATT ACTGCCCTTC GGTGAGCAAC ATAAGCCTAT CGAAGAAGGT CGTTCTTATT TGGTTTATGT GCACGCAAAT CGTGCCGATG AACGGATTGT TGCCTCCTCT AAAATTGATA AGTTTCTTGA TAAAACTGAG CCAGACTACA CCGCTGGACA ACAGGTCGAT TTATATATCG GTGGCACCAC AGATTTAGGC TACAAAGCCA TTATTAATCA TGCTCATTGG GGAGTGATTT ACGAAAACGA AGTGTTCCAA AAACTGCGTT TTGGTCAGCG AGTCAAAGGC TATATTAAAC AAGTGCGCCG CGACGGCAAA ATCGATCTGG TACTGCAACA GGGCAATAAA CAAGAACTCG ATAAGCATGC CCATATCATT TTGATTAAAC TCAAACAAGC GGGAGGCTTT TTAGCCTTAA CCGATAAAAC CGATGCAGAA ATCATTTATG ATCAACTCGG TATGAGCAAA AAAGCCTTTA AAAAAGCCAT TGGAGGCCTA TTCAAAAATG GCCAACTGAG TATCGATAAT GACGGGCTGC GTTTAACTGA AATGGCAGAA TAA
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Protein sequence | MVQIGKTCKL EVVKQVSFGV YLNAHELGQV LLPNKVTPKD CQVGDLLDVF LYLDSEDIVI ATTGRPLAQV GEFAYLKAVA TGPYGAFLDW GLDKDLLLPF GEQHKPIEEG RSYLVYVHAN RADERIVASS KIDKFLDKTE PDYTAGQQVD LYIGGTTDLG YKAIINHAHW GVIYENEVFQ KLRFGQRVKG YIKQVRRDGK IDLVLQQGNK QELDKHAHII LIKLKQAGGF LALTDKTDAE IIYDQLGMSK KAFKKAIGGL FKNGQLSIDN DGLRLTEMAE
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