| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1608 |
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| Symbol | |
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| ID | 5079424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1831412 |
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| End bp | 1831948 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640498741 |
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| Product | OmpA domain-containing protein |
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| Protein accession | YP_001183132 |
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| Protein GI | 146292708 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000267608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATCTGA ACAAGTTGTT AAAAGCTATG TTGGTAGCAC TTCCAATTAT GGCTATTAGT
GCATGTAGCT CAACTTCTGA ATCAGAAACT GATGCAATGG GCTCAACAAA CGGTTCTGGT
AGCGGACTGA ATGGTGGTGG CGTTCAAACC GGTGGTATTG GCGGTATGCT GTCACCAGAA
GAGCAACAAC GTCAGCAATT GGAAGAGTTA AGAAGAGAGC ACATCATTTA CTTCGACTTC
GACCGTAGTG AAGTTCAAAC TGAATTCGCC GCTATATTAG AAGCCCATGG CACTTATCTG
GTAGAGCACC CAAGTGTACG TGTACTGATT GAAGGCCATG CGGATGAGCG TGGCACTCCA
GAGTACAACA TTGCACTAGG TGAGCGTCGT GCTAAAGCGG TTGCTAAATA CTTACAAGGT
ATGGGCGTAC AACCTAGCCA AATGAGTGTT GTCAGCTATG GCGAAGAAAA ACCTCTTGAT
TTTTCTCGCA CTGATGAAGG TTTTGGCAAA AACCGTCGTG CAGTTTTAGT TTACTAA
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| Protein sequence | MDLNKLLKAM LVALPIMAIS ACSSTSESET DAMGSTNGSG SGLNGGGVQT GGIGGMLSPE
EQQRQQLEEL RREHIIYFDF DRSEVQTEFA AILEAHGTYL VEHPSVRVLI EGHADERGTP
EYNIALGERR AKAVAKYLQG MGVQPSQMSV VSYGEEKPLD FSRTDEGFGK NRRAVLVY
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