Gene Sputcn32_1512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1512 
Symbol 
ID5079571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1724333 
End bp1725106 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content46% 
IMG OID640498645 
Producthypothetical protein 
Protein accessionYP_001183036 
Protein GI146292612 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAGTTGT TACTCGAGCC CAGCAACTGG GCTCTACTGG CCATTATTGG TCTTATCGCA 
GGTTTTATCG ATGCTATTGT GGGTGGCGGT GGCTTACTTT CGATCCCGGC ATTATTAACG
CTAGGGATTG CACCACATAC GGCGTTAGGT ACCAACAAAC TTGCCGCGAG TTTTGGATCA
TCCATGGCCG CATGGACATA CTACCGCCAG CATCTTTTTA CACCTTCATT TTGGTATATG
GCCTTTATTG CAACCTTTAT TGGTGCAGTG CTAGGAAGTG TGCTCGTTTA CTTAATTGAT
ACTCAATGGT TAGAAAAAAT CTTACCTTTG CTCATTATTG GTATCGCTAT TTACAGTTTA
CTCAGCCCAA GTGCCATTTC AGATACCGAT TGCCAAGTCC CAATACAGTC GCCACCAACA
CAAAAACAAG GCTTACAAGG TCTGATTCTA GGGGCTTACG ATGGTTTTGC GGGCCCTGGG
ATTGGCGCAT TTTGGACTGT GAGTTCAGGT TCACTCTATA AATTGCCCCT ACTTCATAGC
TGCGGCCTTG CCCGTGCAAT GACGTTTACC AGTAACCTCA CCGCATTAGC TATCTTTGGC
TGGCTTGGCC AAGTGCAATG GCAAATAGGA TTATGGATGG GGTTATGTAT GATGTTAGGC
TCATTTATCG GCGCACGGTG CGCGATTAAA TTTGGCATGC CTTTTATTCG TCCTTTGTTT
ATTTTAATCG TGCTATTGAT TGCCGCTAAT CTGGCCTGGA GTGCATGGTT TTGA
 
Protein sequence
MELLLEPSNW ALLAIIGLIA GFIDAIVGGG GLLSIPALLT LGIAPHTALG TNKLAASFGS 
SMAAWTYYRQ HLFTPSFWYM AFIATFIGAV LGSVLVYLID TQWLEKILPL LIIGIAIYSL
LSPSAISDTD CQVPIQSPPT QKQGLQGLIL GAYDGFAGPG IGAFWTVSSG SLYKLPLLHS
CGLARAMTFT SNLTALAIFG WLGQVQWQIG LWMGLCMMLG SFIGARCAIK FGMPFIRPLF
ILIVLLIAAN LAWSAWF