| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1501 |
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| Symbol | |
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| ID | 5079559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1714435 |
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| End bp | 1715523 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640498633 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_001183025 |
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| Protein GI | 146292601 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR02974] psp operon transcriptional activator PspF |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATAATA AATTTCAACA AGACAATCTT ATCGGCCAAT CCAATGCCCT ACTCGAAGTA
TTAGAACATG TGTCGCAAAT CGCACCTTTG TCTAAACCCG TACTGATTAT TGGTGAACGG
GGCACAGGTA AAGAGCTGAT TGCCGAACGC TTACATTATC TTTCTAAGCG CTGGGATCAA
AGTTTTATTA AGCTAAACTG TTCATCTTTG AGTGAAAACT TACTCGAGAG TGAATTGTTT
GGCCATGAAT CAGGCGCCTT TACTGGCGCC AAAGGTAAAC ACGAAGGCCG CTTTGAGCGC
GCCGACGGCG GCACCTTATT TCTCGATGAA TTAGCCAACA CTTCAGGACT TATCCAAGAA
AAGCTACTGC GTGTTATTGA ATATGGCGAG TTTGAACGGG TCGGTGGCAG TAAAACCGTG
CAGGCTGATG TCCGCTTAAT CTGCGCCGCC AACGAAGATT TACCCGCGTT AGCTGATGCA
GGCGAATTTC GTGCCGACTT GCTCGATAGG CTCGCCTTCG ATGTGATCAC TTTGCCACCA
CTGCGTTGCC GCCCTGAAGA CATTATGACA CTAGCGGAAT ATTTCGCCGT TGGTATGGCA
CGCCAATTAA AACTGCAACT ATTTAGCGGT TTTAGCGCCA ATGCGGTCGA GCAGTTAATG
ACCCACGACT GGCCAGGTAA TATCCGCGAA CTCAAGAACG TGGTTGAACG TAGCGTGTAT
CGCAATGGTG GTGAAAACCG TCCCATCGAG CATATTACCC TCGACCCCTT TGCATCGCCC
TATCGACCTC AAACTCGAGT TAAAACCCGC GAGCGCCAAG TGGTACCTCA GGTTGCCACT
ATTGCAGATA CCGCTCAAAC CGGTATCGCG ATTGAACCAA ACTTACAAGG AGGCTCAGAG
CCTTCTCTAA ATAGCTTTAA TTTTCCGTTG GATTTTAAAG AGCAAACTGA AAAATACGAG
ATGGATCTTA TCCAACAGGC TCTCTCACAC AGTCAATATA ACCAAAAGAA GACCGCTGAG
ATCCTAGGAT TAAGCTACCA CCAGTTGCGT GGCATCCTTA AAAAATACAA TTTACTCGAT
AAAGCATAA
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| Protein sequence | MDNKFQQDNL IGQSNALLEV LEHVSQIAPL SKPVLIIGER GTGKELIAER LHYLSKRWDQ
SFIKLNCSSL SENLLESELF GHESGAFTGA KGKHEGRFER ADGGTLFLDE LANTSGLIQE
KLLRVIEYGE FERVGGSKTV QADVRLICAA NEDLPALADA GEFRADLLDR LAFDVITLPP
LRCRPEDIMT LAEYFAVGMA RQLKLQLFSG FSANAVEQLM THDWPGNIRE LKNVVERSVY
RNGGENRPIE HITLDPFASP YRPQTRVKTR ERQVVPQVAT IADTAQTGIA IEPNLQGGSE
PSLNSFNFPL DFKEQTEKYE MDLIQQALSH SQYNQKKTAE ILGLSYHQLR GILKKYNLLD
KA
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