Gene Sputcn32_1457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1457 
Symbol 
ID5079609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1659028 
End bp1659705 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content48% 
IMG OID640498586 
Producthelix-turn-helix, type 11 domain-containing protein 
Protein accessionYP_001182981 
Protein GI146292557 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.510976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGCG CTGACCGCCT ATTTCAAATA GTGCAAATTC TCAAACATAA ACGCCTGACC 
ACAGCCCAAG AGTTGGCTGA ACGGTTAGAG GTGTCCACGC GCACGGTTTA CCGTGATGTG 
CAGGATTTGT GTTTAAGCGG CATTCCTATT GAAGGAGAGG CGGGGGTCGG CTATTTGTTG 
CGCCACGAGG TGAATGTTCC GCCCTTGATG TTTAACGAAG CCGAATTGGA GGCGATTCAA 
GTTGGCATGC GTATGGTGCA AACTTGGGGT GGCAAAGAAC TCGGTAGTGC CGCTCGGCAG 
GCGATGATTA AAGTCGAAGC TGTGTTGCCT AAACGATTAC AAGCCTACCA ATCCTTAATG 
TTTTCACCGG ATTTTTACCT CGATTCCAAT GAGTTTCAAT TCCTTGACCC TTTGCGTAAT 
GCGGCTCAGC GCCGCGAATA CGTCAAACTC TTCTATCAAG ATGTCAAACT GGATGTTACC 
GAGCGGGAAG TTAGGCCGCT CGCCATCTAT TTTTGGCGTG GTACTTGGAC CTTACTGACA 
TGGTGTGAGC TACGTGCTGA TTTTCGTAAT TTCAGGGTCG ATCGCATCAC AGGTCTTTTG 
CGGTTAAACC GTCATTTTGA TCTCACTCTA GGGCAAGAGC TTGAAGATTA TATTTGCCTA 
ATGGATAAAG AAAAATAG
 
Protein sequence
MRRADRLFQI VQILKHKRLT TAQELAERLE VSTRTVYRDV QDLCLSGIPI EGEAGVGYLL 
RHEVNVPPLM FNEAELEAIQ VGMRMVQTWG GKELGSAARQ AMIKVEAVLP KRLQAYQSLM 
FSPDFYLDSN EFQFLDPLRN AAQRREYVKL FYQDVKLDVT EREVRPLAIY FWRGTWTLLT 
WCELRADFRN FRVDRITGLL RLNRHFDLTL GQELEDYICL MDKEK