Gene Sputcn32_1456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1456 
Symbol 
ID5079608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1658511 
End bp1658975 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content46% 
IMG OID640498585 
Producttranscription activator, effector binding 
Protein accessionYP_001182980 
Protein GI146292556 
COG category[S] Function unknown 
COG ID[COG3708] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.259797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAA CAAAGATGGA TGTGGTTTAT ATTGATGCTC GACCCTTACT TGGACTCAGT 
ACCCGCACGA GCAATAGGGC TGAAATGTCC GCCGATAGCG CGAAAATAGG CGGTCTGTGG 
CAAGCCTTTT TTGAATCATC CCAGCTCACC GCTATGCTCA ATTCGCCCAT GTATGGCGTG 
TATTATGATT ATGAGTCAGA CATGAATGGC GAGTTTTCTG TGCTGGTGGG TAAGGCAATT 
GATGCCCCTG TTGATACAAG TCATTTTATG CCATTGGAGC TTAACGCGGG CAAGTACCTA 
AAATTCACCG CTCAGGGTGA TATGCCCCAG TGTGTTATCG ATCTTTGGGG GCAAGTGTGG 
GGTTATTTTA GCGCGGCTGA ATGTTTGCAT CAGCGGCGTT ATCAAACGGA TTTTGAAGTC 
TATCTTAGTG CTACTGAGGT TGAGATCTAT ATCGGGATTT TATGA
 
Protein sequence
MEETKMDVVY IDARPLLGLS TRTSNRAEMS ADSAKIGGLW QAFFESSQLT AMLNSPMYGV 
YYDYESDMNG EFSVLVGKAI DAPVDTSHFM PLELNAGKYL KFTAQGDMPQ CVIDLWGQVW 
GYFSAAECLH QRRYQTDFEV YLSATEVEIY IGIL