Gene Sputcn32_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1401 
Symbol 
ID5080596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1590413 
End bp1591582 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content48% 
IMG OID640498532 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001182927 
Protein GI146292503 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAATG TAGTAGATAA TGACGTGGTC GAGCATGTCG CAAATCAGGT CACGACCACA 
CAAAATGTGG TGTTTCAAAC CTTAGCCACT GCTTCTGGCA AATTGGTTGG AGTAGTCACA
CTCAATGTGG AAAAAGCCCT CAACGCCTTA GACTTAGACA TGGTGCGCGC CATGACGGCG
CAGCTTAACC TGTGGAAGAA AGATCCCCTT ATCGCTTGTA TTGTATTAGA TGGCAGCGGT
GAGAAGGCAT TTTGTGCTGG TGGTGATGTG CGCGCTTTAT ACCATGCTTC CATTGCCGCT
AAGGGACAAG TGACTGAGGA AGCAAAGGTT TTCTTCGAAG AGGAATATCG CCTCGATTAT
CTACTGCATA CCTTTGGCAA ACCTGTATTG GTGTGGGGCG ATGGCATAGT CATGGGCGGT
GGCCTCGGTT TGATGGCGGG CGCGAGCCAC AGAGTCGTTA CCGAAACCTC ACGCATCGCC
ATGCCAGAAG TCACCATCGG CCTGTATCCC GATGTGGGCG GCAGTTATTT CCTTAATCGT
ATGCAGGGCA AGATGGGATT GTTTTTGGGA TTGACCGCCT ATCAACTCAA TGCCGCCGAT
GCCTGTTATG TGGGATTGGC CGATCATTAT CTGAACCGCG ATGACAAAGA ACTGATGTTC
GATGCCATGG CAACCTTAGA TTGGAGCGAT ACGCCAGCGC TTAATCACCA ACGTTTAGAT
AGCATGATCA ACGAGCTGTC TAACCAAGTG GATATTCCTA AGGGCGAGAG TGTATTAGCT
GAAAGCCAAG AGATTATCGA CAGGTTGATG GCGGGGAGTT TACAAGATAT TGCAGCACGT
ATGTCAACAC TGATATCGGA AGAAAAGTGG CTAATCAAGG CGCGGGATAC TTTTCTTGCG
GGTAGTCCTA TCAGTTGGCA TTTAGTCTAT ATCCAAGCAC AGCTTGGTTC AAAATTAAGT
CTAGCCCAAT GTTTTAAATG GGAATTAACG ACAAGTGTTA ACGTGTGCGC CCACGGTGAT
TTCTGTGAAG GTGTACGTGC ACTCTTGATC GATAAAGATA AGAAACCTCA ATGGCGTTTT
AAGGATGTTA ACTCAGTGCC CACAGCGGTA CTTGAGCAAA TATTGGCTTC TCCATGGGGC
GAGGCACATC CTTTTAACCA ACTGAGTTAA
 
Protein sequence
MTNVVDNDVV EHVANQVTTT QNVVFQTLAT ASGKLVGVVT LNVEKALNAL DLDMVRAMTA 
QLNLWKKDPL IACIVLDGSG EKAFCAGGDV RALYHASIAA KGQVTEEAKV FFEEEYRLDY
LLHTFGKPVL VWGDGIVMGG GLGLMAGASH RVVTETSRIA MPEVTIGLYP DVGGSYFLNR
MQGKMGLFLG LTAYQLNAAD ACYVGLADHY LNRDDKELMF DAMATLDWSD TPALNHQRLD
SMINELSNQV DIPKGESVLA ESQEIIDRLM AGSLQDIAAR MSTLISEEKW LIKARDTFLA
GSPISWHLVY IQAQLGSKLS LAQCFKWELT TSVNVCAHGD FCEGVRALLI DKDKKPQWRF
KDVNSVPTAV LEQILASPWG EAHPFNQLS