Gene Sputcn32_1391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1391 
Symbol 
ID5080586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1579296 
End bp1579949 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content41% 
IMG OID640498522 
Producthypothetical protein 
Protein accessionYP_001182917 
Protein GI146292493 
COG category[S] Function unknown 
COG ID[COG3575] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.181169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTACTGT TCATGCTCAA TATGCTTTTC GTTGACAGTA AACCCAATAG TGATGTGATG 
AATGAAGCAG AACGAAAGAG TCAGTTACTC GAATGGATAA CCCAAGATTG CGAGCGGATG 
AGGGCGCTTG AACTTGCGTT CCTATGCGCC AAAGTACACT CTATGCCGCA GTGGTGCCTT 
GCGGCGGGAT TTGTACGCAA TCTCGTATGG GATCGTTTAC ATGGGTTTCA GTATAGTCTA 
CTCAATGATA TTGATTTAAT TTATTTTTGC CCCTTAGATA CTCGCCCTGA ACGTGATAGG 
GCGATTGAAG CTTATCTCTA TAAACAAGCG CCTGATTTAC CTTGGTCGGT AAAAAATCAG 
GCGCGAATGC ACCTTAAAAA TCAAGATCCC CCTTATCTGT CTTGCATAGA TGCCATGACC 
TATTGGCCGG AATTAGAAAC GGCAGTTGGT GTGTGTTATC AAAAAAACAC TAGTGACCTA 
TTGAGTAATA CGCCACGAGT GAATGCCTTA ACATTGGTCG CTCCTTTTGG TGTAAATTCA 
CTCTTTGAAT TAAAACTGAC AGCCAATCCC AGTAGAGCAT TATCGATTTT TCATCAACGC 
GTTTTGGATA AAGGTTGGCT TATTCAATAT CCTTTACTTC AATTAATCTA TTAA
 
Protein sequence
MVLFMLNMLF VDSKPNSDVM NEAERKSQLL EWITQDCERM RALELAFLCA KVHSMPQWCL 
AAGFVRNLVW DRLHGFQYSL LNDIDLIYFC PLDTRPERDR AIEAYLYKQA PDLPWSVKNQ 
ARMHLKNQDP PYLSCIDAMT YWPELETAVG VCYQKNTSDL LSNTPRVNAL TLVAPFGVNS 
LFELKLTANP SRALSIFHQR VLDKGWLIQY PLLQLIY